RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 SPATA33Q96N06 139 aa21.11■□□□□ 0.97
CDHR4-201ENST00000343366 TEKT3Q9BXF9 490 aa21.11■□□□□ 0.97
CDHR4-201ENST00000343366 PRDM12Q9H4Q4 367 aa21.11■□□□□ 0.97
CDHR4-201ENST00000343366 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.11■□□□□ 0.97
CDHR4-201ENST00000343366 MYH15Q9Y2K3 1946 aa21.11■□□□□ 0.97
CDHR4-201ENST00000343366 SLC37A4O43826 429 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 GAS7O60861 476 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 ATP9AO75110 1047 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 PPFIA4O75335 1185 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 C6orf222P0C671 652 aaPredicted RBP21.1■□□□□ 0.97
CDHR4-201ENST00000343366 SFNP31947 248 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 DDIT3P35638 169 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 PRPHP41219 470 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 TOB1P50616 345 aaPredicted RBP21.1■□□□□ 0.97
CDHR4-201ENST00000343366 ARHGAP1Q07960 439 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 PPIGQ13427 754 aaKnown RBP eCLIP21.1■□□□□ 0.97
CDHR4-201ENST00000343366 FSCN1Q16658 493 aaKnown RBP21.1■□□□□ 0.97
CDHR4-201ENST00000343366 LRCH2Q5VUJ6 765 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 ZNF746Q6NUN9 644 aaPredicted RBP21.1■□□□□ 0.97
CDHR4-201ENST00000343366 CYFIP1Q7L576 1253 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 RDM1Q8NG50 284 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 GAS2L1Q99501 681 aaPredicted RBP21.1■□□□□ 0.97
CDHR4-201ENST00000343366 POLR3EQ9NVU0 708 aa21.1■□□□□ 0.97
CDHR4-201ENST00000343366 TCF20Q9UGU0 1960 aaKnown RBP21.1■□□□□ 0.97
CDHR4-201ENST00000343366 CTAGE5O15320 804 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 CABYRO75952 493 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 CSF2RAP15509 400 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 ZNF174Q15697 407 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 DGKDQ16760 1214 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 ARL6IP4Q66PJ3 421 aaKnown RBP21.09■□□□□ 0.97
CDHR4-201ENST00000343366 FAM126BQ8IXS8 530 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 SEPT1Q8WYJ6 367 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 RAB34Q9BZG1 259 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 CFAP45Q9UL16 551 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 PCDHA12Q9UN75 941 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 STK24Q9Y6E0 443 aa21.09■□□□□ 0.97
CDHR4-201ENST00000343366 MORC2Q9Y6X9 1032 aaPredicted RBP21.09■□□□□ 0.97
CDHR4-201ENST00000343366 MROH7Q68CQ1 1323 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 DHX15O43143 795 aaKnown RBP21.08■□□□□ 0.97
CDHR4-201ENST00000343366 PSMD10O75832 226 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 OR52Z1P0C646 297 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 JAK3P52333 1124 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 ITGB3BPQ13352 177 aaPredicted RBP21.08■□□□□ 0.97
CDHR4-201ENST00000343366 TMEM266Q2M3C6 531 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 GNASQ5JWF2 1037 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 MTMR9Q96QG7 549 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 SEZ6LQ9BYH1 1024 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 PCDHB6Q9Y5E3 794 aa21.08■□□□□ 0.97
CDHR4-201ENST00000343366 CD4P01730 458 aa21.07■□□□□ 0.96
CDHR4-201ENST00000343366 HOXD8P13378 290 aaPredicted RBP21.07■□□□□ 0.96
CDHR4-201ENST00000343366 MRPS5P82675 430 aaKnown RBP21.07■□□□□ 0.96
CDHR4-201ENST00000343366 PPP2R5CQ13362 524 aa21.07■□□□□ 0.96
CDHR4-201ENST00000343366 ZNF365Q70YC5 407 aa21.07■□□□□ 0.96
CDHR4-201ENST00000343366 HERVK_113Q902F9 699 aa21.07■□□□□ 0.96
CDHR4-201ENST00000343366 COPS5Q92905 334 aa21.07■□□□□ 0.96
CDHR4-201ENST00000343366 CXXC1Q9P0U4 656 aaPredicted RBP21.07■□□□□ 0.96
CDHR4-201ENST00000343366 WDR64B1ANS9 1081 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 ATG7O95352 703 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 MMP3P08254 477 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 ATP2C1P98194 919 aaPredicted RBP21.06■□□□□ 0.96
CDHR4-201ENST00000343366 PTGDRQ13258 359 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 MIS18BP1Q6P0N0 1132 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 PSRC1Q6PGN9 363 aaPredicted RBP21.06■□□□□ 0.96
CDHR4-201ENST00000343366 AFG1LQ8WV93 481 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 HAS1Q92839 578 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 TNPO1Q92973 898 aaKnown RBP21.06■□□□□ 0.96
CDHR4-201ENST00000343366 UHRF1Q96T88 793 aaPredicted RBP21.06■□□□□ 0.96
CDHR4-201ENST00000343366 GPR20Q99678 358 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 KATNAL1Q9BW62 490 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 CHMP5Q9NZZ3 219 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 PKD2L1Q9P0L9 805 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 DOCK5Q9H7D0 1870 aa21.06■□□□□ 0.96
CDHR4-201ENST00000343366 ARVCFO00192 962 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 ASGR1P07306 291 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 PSAPP07602 524 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 ACRP10323 421 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 PKP1Q13835 747 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 PDIA5Q14554 519 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 HSDL1Q3SXM5 330 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 SLC43A3Q8NBI5 491 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 PPM1EQ8WY54 764 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 VWCEQ96DN2 955 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 GLT1D1Q96MS3 346 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 TTC12Q9H892 705 aaPredicted RBP21.05■□□□□ 0.96
CDHR4-201ENST00000343366 YBX2Q9Y2T7 364 aaKnown RBP21.05■□□□□ 0.96
CDHR4-201ENST00000343366 PCDHA10Q9Y5I2 948 aa21.05■□□□□ 0.96
CDHR4-201ENST00000343366 DKC1O60832 514 aaKnown RBP eCLIP21.04■□□□□ 0.96
CDHR4-201ENST00000343366 TXKP42681 527 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 SLC26A2P50443 739 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 ACTR2P61160 394 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 SF3A1Q15459 793 aaKnown RBP21.04■□□□□ 0.96
CDHR4-201ENST00000343366 TMEM63BQ5T3F8 832 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 FAM160B1Q5W0V3 765 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 DTHD1Q6ZMT9 781 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 TMEM199Q8N511 208 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 C4orf32Q8N8J7 132 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 AZI2Q9H6S1 392 aa21.04■□□□□ 0.96
CDHR4-201ENST00000343366 ZNF215Q9UL58 517 aaPredicted RBP21.04■□□□□ 0.96
CDHR4-201ENST00000343366 SAMM50Q9Y512 469 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms