RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 CEP72Q9P209 647 aa16.64■□□□□ 0.25
SNX18-202ENST00000343017 TRIM33Q9UPN9 1127 aa16.64■□□□□ 0.25
SNX18-202ENST00000343017 ALDH5A1P51649 535 aaPredicted RBP16.63■□□□□ 0.25
SNX18-202ENST00000343017 PTK2Q05397 1052 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 ZKSCAN8Q15776 578 aaPredicted RBP16.63■□□□□ 0.25
SNX18-202ENST00000343017 NUDT12Q9BQG2 462 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 ADAM7Q9H2U9 754 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 UBAP1LF5GYI3 381 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 PGRMC1O00264 195 aaKnown RBP16.63■□□□□ 0.25
SNX18-202ENST00000343017 CYTH3O43739 400 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 USP11P51784 963 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 FAM98CQ17RN3 349 aaKnown RBP16.63■□□□□ 0.25
SNX18-202ENST00000343017 C11orf91Q3C1V1 193 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 CCDC38Q502W7 563 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 CAPRIN2Q6IMN6 1127 aaKnown RBP16.63■□□□□ 0.25
SNX18-202ENST00000343017 TRPM8Q7Z2W7 1104 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 ERICH1Q86X53 443 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 ANKS4BQ8N8V4 417 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 TLCD1Q96CP7 247 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 L3MBTL3Q96JM7 780 aaPredicted RBP16.63■□□□□ 0.25
SNX18-202ENST00000343017 CCDC113Q9H0I3 377 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 AZI2Q9H6S1 392 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 AMPD3Q01432 767 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 GRB10Q13322 594 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 ARHGEF10LQ9HCE6 1279 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 SWAP70Q9UH65 585 aa16.63■□□□□ 0.25
SNX18-202ENST00000343017 KCNQ2O43526 872 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 THEMIS2Q5TEJ8 643 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 ARMC9Q7Z3E5 817 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 ZNF571Q7Z3V5 609 aaPredicted RBP16.62■□□□□ 0.25
SNX18-202ENST00000343017 PIGWQ7Z7B1 504 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 ATXN2LQ8WWM7 1075 aaKnown RBP16.62■□□□□ 0.25
SNX18-202ENST00000343017 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.62■□□□□ 0.25
SNX18-202ENST00000343017 LUC7LQ9NQ29 371 aaKnown RBP16.62■□□□□ 0.25
SNX18-202ENST00000343017 MTMR3Q13615 1198 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 LRRC14Q15048 493 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 DAAM2Q86T65 1068 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 GLG1Q92896 1179 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
SNX18-202ENST00000343017 IGF2BP3O00425 579 aaKnown RBP eCLIP16.61■□□□□ 0.25
SNX18-202ENST00000343017 AP1G2O75843 785 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 BRD2P25440 801 aaKnown RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 PRPF4BQ13523 1007 aaKnown RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 ASIC2Q16515 512 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 CDCA2Q69YH5 1023 aaPredicted RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 SPDYE1Q8NFV5 336 aaPredicted RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 MGARPQ8TDB4 240 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 GJA10Q969M2 543 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 ACTRT1Q8TDG2 376 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 P3H4Q92791 437 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 CALML4Q96GE6 196 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 PNMA5Q96PV4 448 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 EPB41L4BQ9H329 900 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 CUEDC2Q9H467 287 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 MLXIPLQ9NP71 852 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 JAG2Q9Y219 1238 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.61■□□□□ 0.25
SNX18-202ENST00000343017 MYH1P12882 1939 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 POTEMA6NI47 508 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 KRT16P08779 473 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 NQO1P15559 274 aaKnown RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 NCALDP61601 193 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 SNX1Q13596 522 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 UNC13DQ70J99 1090 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 PEX26Q7Z412 305 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 GUF1Q8N442 669 aaKnown RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 LRRC57Q8N9N7 239 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 PNMA1Q8ND90 353 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 RNF25Q96BH1 459 aaPredicted RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 ECT2Q9H8V3 914 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 KCNMB3Q9NPA1 279 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 INTS9Q9NV88 658 aaKnown RBP16.61■□□□□ 0.25
SNX18-202ENST00000343017 SAMD15Q9P1V8 674 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 PNMA3Q9UL41 463 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 COL4A3BPQ9Y5P4 624 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 BCORQ6W2J9 1755 aa16.61■□□□□ 0.25
SNX18-202ENST00000343017 USP17L3A6NCW0 530 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 USP17L4A6NCW7 530 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 SPDYE3A6NKU9 549 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 FOXO6A8MYZ6 492 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 RARAP10276 462 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 KIF5BP33176 963 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 PLTPP55058 493 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 MIS18BP1Q6P0N0 1132 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 USP17L1Q7RTZ2 530 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.6■□□□□ 0.25
SNX18-202ENST00000343017 DDX12PQ92771 950 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 SAAL1Q96ER3 474 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 PBKQ96KB5 322 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 VAT1LQ9HCJ6 419 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 NOP53Q9NZM5 478 aaKnown RBP16.6■□□□□ 0.25
SNX18-202ENST00000343017 DUOX1Q9NRD9 1551 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 STXBP3O00186 592 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 ZBTB48P10074 688 aaPredicted RBP16.6■□□□□ 0.25
SNX18-202ENST00000343017 TFAP4Q01664 338 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 CHRNDQ07001 517 aa16.6■□□□□ 0.25
SNX18-202ENST00000343017 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms