RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 APBA1Q02410 837 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 ADAM9Q13443 819 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 RAPGEF1Q13905 1077 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 NAB2Q15742 525 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 SLFN13Q68D06 897 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 AIPL1Q9NZN9 384 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 NYAP2Q9P242 653 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 MEIS2O14770 477 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 RAD21O60216 631 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 CRKP46108 304 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 NAP1L1P55209 391 aaKnown RBP13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 ARHGAP4P98171 946 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 KANSL2Q9H9L4 492 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 RBM12Q9NTZ6 932 aaKnown RBP13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 DONSONQ9NYP3 566 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 RNF14Q9UBS8 474 aa13.55□□□□□ -0.24
UBE2L3-201ENST00000342192 CETN3O15182 167 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 ONECUT3O60422 494 aaPredicted RBP13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 EPS15P42566 896 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 EPHB4P54760 987 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 CFAP221Q4G0U5 840 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 C8orf74Q6P047 294 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 SEPT12Q8IYM1 358 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 TBC1D5Q92609 795 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 TBX3O15119 743 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 PALMO75781 387 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 NR2F2P24468 414 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 CASP5P51878 434 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 SLC7A5Q01650 507 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 ASIC2Q16515 512 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 SHROOM1Q2M3G4 852 aaPredicted RBP13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 Q4G0T1 1027 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 GLE1Q53GS7 698 aaKnown RBP13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 MCTP2Q6DN12 878 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 EMBQ6PCB8 327 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 CATSPER3Q86XQ3 398 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 ERMNQ8TAM6 284 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 ZDHHC15Q96MV8 337 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 P2RX7Q99572 595 aaKnown RBP13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 HINFPQ9BQA5 517 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 PCDHGC5Q9Y5F6 944 aa13.54□□□□□ -0.24
UBE2L3-201ENST00000342192 KLRC1P26715 233 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 KLHL30Q0D2K2 578 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 KCNH2Q12809 1159 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 GIT2Q14161 759 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 PPP2R5AQ15172 486 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 LRRC31Q6UY01 552 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 CCDC91Q7Z6B0 441 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 ZHX3Q9H4I2 956 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 TRAF3IP3Q9Y228 551 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 A0A087X0T9 212 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 FAM196BA6NMK8 535 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 FAM228BP0C875 321 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 MRPS25P82663 173 aaKnown RBP13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 CERKLQ49MI3 558 aaPredicted RBP13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 PRR16Q569H4 304 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 LENG9Q96B70 501 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 COL11A2P13942 1736 aaPredicted RBP13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 NPR1P16066 1061 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 RPA1P27694 616 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 EPM2AIP1Q7L775 607 aaPredicted RBP13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 FRMD5Q7Z6J6 570 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 SYT2Q8N9I0 419 aaPredicted RBP13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 CAVIN3Q969G5 261 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 MS4A14Q96JA4 679 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 AMNQ9BXJ7 453 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 PLEKHA4Q9H4M7 779 aa13.53□□□□□ -0.24
UBE2L3-201ENST00000342192 DDTLA6NHG4 134 aaPredicted RBP13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 SPATA31C1P0DKV0 1188 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 CACNB3P54284 484 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 PSMC6P62333 389 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 ARID5AQ03989 594 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 MEI1Q5TIA1 1274 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 DPY19L2P1Q6NXN4 242 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 SFR1Q86XK3 245 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 REEP2Q9BRK0 252 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 PLCB1Q9NQ66 1216 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 DNM3Q9UQ16 869 aa13.52□□□□□ -0.24
UBE2L3-201ENST00000342192 GRID2IPA4D2P6 1211 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 G3V3G9 751 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 FTCDO95954 541 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 MAP2K2P36507 400 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 SREBF1P36956 1147 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 ICA1Q05084 483 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 TCP10Q12799 353 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 PABPC4Q13310 644 aaKnown RBP eCLIP13.52□□□□□ -0.252e-45■■□□□ 11.9
UBE2L3-201ENST00000342192 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 KIAA0753Q2KHM9 967 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 DCAF8Q5TAQ9 597 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 SIAH1Q8IUQ4 282 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 FAM76AQ8TAV0 307 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 SGSM3Q96HU1 749 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 SH3GL2Q99962 352 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 PACSIN1Q9BY11 444 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 PI4KBQ9UBF8 816 aa13.52□□□□□ -0.25
UBE2L3-201ENST00000342192 ARMCX3Q9UH62 379 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms