RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 GRIK4Q16099 956 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 PLPPR4Q7Z2D5 763 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 PBX4Q9BYU1 374 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 C22orf23Q9BZE7 217 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 GJB4Q9NTQ9 266 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 TBC1D22BQ9NU19 505 aa16.58■□□□□ 0.24
ERCC1-203ENST00000340192 MYH9P35579 1960 aaKnown RBP16.58■□□□□ 0.24
ERCC1-203ENST00000340192 SIP14410 1827 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 IGKV6D-21A0A0A0MT36 114 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 RSPH10B2B2RC85 870 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 RBAK-RBAKDNI3L0D1 243 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 RSPH10BP0C881 870 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 FDPSP14324 419 aaKnown RBP16.57■□□□□ 0.24
ERCC1-203ENST00000340192 ATP2A2P16615 1042 aaKnown RBP16.57■□□□□ 0.24
ERCC1-203ENST00000340192 ABHD15Q6UXT9 468 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 RUFY4Q6ZNE9 571 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 NSUN7Q8NE18 718 aaKnown RBP16.57■□□□□ 0.24
ERCC1-203ENST00000340192 WASF1Q92558 559 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 TIFAQ96CG3 184 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 GUCD1Q96NT3 240 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 KIF2CQ99661 725 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 TRPC6Q9Y210 931 aa16.57■□□□□ 0.24
ERCC1-203ENST00000340192 TMEM265A0A087WTH1 108 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 BACH1O14867 736 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 MSH4O15457 936 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 CAND2O75155 1236 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 BAIAP3O94812 1187 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 CTSHP09668 335 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 INSRRP14616 1297 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 IGBP1P78318 339 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 PLCB4Q15147 1175 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.24
ERCC1-203ENST00000340192 TCTN1Q2MV58 587 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 MARCH8Q5T0T0 291 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 ZNF746Q6NUN9 644 aaPredicted RBP16.56■□□□□ 0.24
ERCC1-203ENST00000340192 MIS18BP1Q6P0N0 1132 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 CNKSR3Q6P9H4 555 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 TUBE1Q9UJT0 475 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 CHD7Q9P2D1 2997 aa16.56■□□□□ 0.24
ERCC1-203ENST00000340192 MBLAC1A4D2B0 266 aaPredicted RBP16.55■□□□□ 0.24
ERCC1-203ENST00000340192 RRN3P2A6NIE6 340 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 JAK2O60674 1132 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 TDP2O95551 362 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 SLC26A2P50443 739 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 RABGGTBP53611 331 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 KRT76Q01546 638 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 ST3GAL1Q11201 340 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 RAB30Q15771 203 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 INF2Q27J81 1249 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 Q4G0T1 1027 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 FAM160B1Q5W0V3 765 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 SWSAP1Q6NVH7 229 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 CCDC60Q8IWA6 550 aaPredicted RBP16.55■□□□□ 0.24
ERCC1-203ENST00000340192 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 TNPO1Q92973 898 aaKnown RBP16.55■□□□□ 0.24
ERCC1-203ENST00000340192 ZNF302Q9NR11 478 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 TCEAL9Q9UHQ7 104 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 MSRAQ9UJ68 235 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 LIMCH1Q9UPQ0 1083 aa16.55■□□□□ 0.24
ERCC1-203ENST00000340192 MICAL3Q7RTP6 2002 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 CYP3A7-CYP3A51PA0A087WV96 503 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 CCDC194A0A1B0GVG4 234 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 CYP3A7P24462 503 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 RBM25P49756 843 aaKnown RBP16.54■□□□□ 0.24
ERCC1-203ENST00000340192 TAF2Q6P1X5 1199 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 PDXDC2PQ6P474 469 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 POTEBQ6S5H4 581 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 SMAP1Q8IYB5 467 aaPredicted RBP16.54■□□□□ 0.24
ERCC1-203ENST00000340192 TRAPPC12Q8WVT3 735 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 SLC5A5Q92911 643 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 GJA10Q969M2 543 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 ZBTB10Q96DT7 871 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 SLC9A7Q96T83 725 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 RIT2Q99578 217 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 CDX2Q99626 313 aaPredicted RBP16.54■□□□□ 0.24
ERCC1-203ENST00000340192 ZNF576Q9H609 170 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 STXBP5LQ9Y2K9 1186 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 YBX2Q9Y2T7 364 aaKnown RBP16.54■□□□□ 0.24
ERCC1-203ENST00000340192 PCDHA10Q9Y5I2 948 aa16.54■□□□□ 0.24
ERCC1-203ENST00000340192 ABHD14A-ACY1A0A1B0GW23 586 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 GAS7O60861 476 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 PSAPP07602 524 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 MYOGP15173 224 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 KCNJ6P48051 423 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 WDR5P61964 334 aaKnown RBP16.53■□□□□ 0.24
ERCC1-203ENST00000340192 IKBKEQ14164 716 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 FAM26DQ5JW98 314 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 LRCH2Q5VUJ6 765 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 MOXD1Q6UVY6 613 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 PIK3AP1Q6ZUJ8 805 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 RPAINQ86UA6 219 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 PHOSPHO2Q8TCD6 241 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 ATP8B4Q8TF62 1192 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 MBOAT7Q96N66 472 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 OSBPL7Q9BZF2 842 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 NKX2-4Q9H2Z4 354 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 SAMM50Q9Y512 469 aa16.53■□□□□ 0.24
ERCC1-203ENST00000340192 PCDHA11Q9Y5I1 949 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms