RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 BACH1O14867 736 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 ATP2B1P20020 1258 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 HOXC8P31273 242 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 LARP1BQ659C4 914 aaKnown RBP17.22■□□□□ 0.35
UBE3B-201ENST00000340074 SWSAP1Q6NVH7 229 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 PLPPR4Q7Z2D5 763 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 HAS1Q92839 578 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 FAM20AQ96MK3 541 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 ZNF302Q9NR11 478 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 DISC1Q9NRI5 854 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 SETD4Q9NVD3 440 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 PCDHA10Q9Y5I2 948 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 LAMA3Q16787 3333 aa17.22■□□□□ 0.35
UBE3B-201ENST00000340074 WDR64B1ANS9 1081 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 TBX3O15119 743 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 PSAPP07602 524 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 BMP8BP34820 402 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 FAM160B1Q5W0V3 765 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 MCTP1Q6DN14 999 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 MFSD5Q6N075 450 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 HSCBQ8IWL3 235 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 AFAP1L1Q8TED9 768 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 LMBR1Q8WVP7 490 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 ATP6V0A1Q93050 837 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 INTS4Q96HW7 963 aaKnown RBP17.21■□□□□ 0.35
UBE3B-201ENST00000340074 WNT8AQ9H1J5 351 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
UBE3B-201ENST00000340074 TREHO43280 583 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 MARCH6O60337 910 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 SFNP31947 248 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 MCM7P33993 719 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 PLCB4Q15147 1175 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 PDXDC2PQ6P474 469 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 B3GNT9Q6UX72 402 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 TET1Q8NFU7 2136 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 DHX38Q92620 1227 aaKnown RBP17.21■□□□□ 0.34
UBE3B-201ENST00000340074 UBE2OQ9C0C9 1292 aaKnown RBP17.21■□□□□ 0.34
UBE3B-201ENST00000340074 GABBR1Q9UBS5 961 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 VAV3Q9UKW4 847 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 TRPC6Q9Y210 931 aa17.21■□□□□ 0.34
UBE3B-201ENST00000340074 MAFBQ9Y5Q3 323 aaPredicted RBP17.21■□□□□ 0.34
UBE3B-201ENST00000340074 NRCAMQ92823 1304 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 NEMFO60524 1076 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 BAG4O95429 457 aaKnown RBP17.2■□□□□ 0.34
UBE3B-201ENST00000340074 GNAT1P11488 350 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 SLC26A2P50443 739 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 JAK3P52333 1124 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 CCL23P55773 120 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 ADAM17P78536 824 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 FPGSQ05932 587 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 PPFIA1Q13136 1202 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 PTK7Q13308 1070 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 BFSP2Q13515 415 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 GRIK4Q16099 956 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 CALCRLQ16602 461 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 MIER3Q7Z3K6 550 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 WNT8BQ93098 351 aa17.2■□□□□ 0.34
UBE3B-201ENST00000340074 TRIOBPQ9H2D6 2365 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 SIP14410 1827 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 POTEB3A0JP26 581 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 PITPNM1O00562 1244 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 INSRRP14616 1297 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 CSF2RAP15509 400 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 ATP4AP20648 1035 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 TRAPPC10P48553 1259 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 IGBP1P78318 339 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 PPP2R5CQ13362 524 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 NBR1Q14596 966 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 ZNF174Q15697 407 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 TTC38Q5R3I4 469 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 POTEBQ6S5H4 581 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 TRMT1LQ7Z2T5 733 aaKnown RBP17.19■□□□□ 0.34
UBE3B-201ENST00000340074 SERINC5Q86VE9 423 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 SLFN12Q8IYM2 578 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 TMEM199Q8N511 208 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 RDM1Q8NG50 284 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 SCLYQ96I15 445 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 NOL7Q9UMY1 257 aaKnown RBP17.19■□□□□ 0.34
UBE3B-201ENST00000340074 IGSF9BQ9UPX0 1349 aa17.19■□□□□ 0.34
UBE3B-201ENST00000340074 EML1O00423 815 aa17.18■□□□□ 0.34
UBE3B-201ENST00000340074 CKBP12277 381 aa17.18■□□□□ 0.34
UBE3B-201ENST00000340074 TOB1P50616 345 aaPredicted RBP17.18■□□□□ 0.34
UBE3B-201ENST00000340074 EPHB4P54760 987 aa17.18■□□□□ 0.34
UBE3B-201ENST00000340074 UGCGQ16739 394 aa17.18■□□□□ 0.34
UBE3B-201ENST00000340074 CKAP2LQ8IYA6 745 aa17.18■□□□□ 0.34
UBE3B-201ENST00000340074 CCDC155Q8N6L0 562 aa17.18■□□□□ 0.34
UBE3B-201ENST00000340074 ATP8B4Q8TF62 1192 aa17.18■□□□□ 0.34
UBE3B-201ENST00000340074 TNPO1Q92973 898 aaKnown RBP17.18■□□□□ 0.34
UBE3B-201ENST00000340074 MTMR9Q96QG7 549 aa17.18■□□□□ 0.34
UBE3B-201ENST00000340074 MYH15Q9Y2K3 1946 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 ARID2Q68CP9 1835 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 PDCP20941 246 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 TXKP42681 527 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 SPIRE1Q08AE8 756 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 PPIGQ13427 754 aaKnown RBP eCLIP17.17■□□□□ 0.345e-6■■■■□ 20.2
UBE3B-201ENST00000340074 TRIM71Q2Q1W2 868 aaKnown RBP17.17■□□□□ 0.34
UBE3B-201ENST00000340074 MARCH8Q5T0T0 291 aa17.17■□□□□ 0.34
UBE3B-201ENST00000340074 RETREG2Q8NC44 543 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms