RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 BRDTQ58F21 947 aaPredicted RBP16.53■□□□□ 0.24
CSRP1-201ENST00000340006 UTP14CQ5TAP6 766 aaKnown RBP16.53■□□□□ 0.24
CSRP1-201ENST00000340006 GPR20Q99678 358 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 HSD17B14Q9BPX1 270 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 POLR3CQ9BUI4 534 aaPredicted RBP16.53■□□□□ 0.24
CSRP1-201ENST00000340006 NT5C3AQ9H0P0 336 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 AZI2Q9H6S1 392 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 GABBR1Q9UBS5 961 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 A0A087WWV3 80 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 GSTTP1A0A1W2PQM5 241 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 NR1I2O75469 434 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 ZNF202O95125 648 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 ATG7O95352 703 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 QARSP47897 775 aaKnown RBP16.53■□□□□ 0.24
CSRP1-201ENST00000340006 FAM160A1Q05DH4 1040 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 PKN2Q16513 984 aaKnown RBP16.53■□□□□ 0.24
CSRP1-201ENST00000340006 MAP3K21Q5TCX8 1036 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 IQUBQ8NA54 791 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 PPTC7Q8NI37 304 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 GLG1Q92896 1179 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 DHX58Q96C10 678 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 TUFT1Q9NNX1 390 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 TMEM63CQ9P1W3 806 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 Q9Y3F1 56 aa16.53■□□□□ 0.24
CSRP1-201ENST00000340006 PPFIA4O75335 1185 aa16.52■□□□□ 0.24
CSRP1-201ENST00000340006 SPATA31C1P0DKV0 1188 aa16.52■□□□□ 0.24
CSRP1-201ENST00000340006 STAT6P42226 847 aa16.52■□□□□ 0.24
CSRP1-201ENST00000340006 CKAP2LQ8IYA6 745 aa16.52■□□□□ 0.24
CSRP1-201ENST00000340006 EMID1Q96A84 441 aaPredicted RBP16.52■□□□□ 0.24
CSRP1-201ENST00000340006 PYM1Q9BRP8 204 aaKnown RBP16.52■□□□□ 0.24
CSRP1-201ENST00000340006 ZSWIM4Q9H7M6 989 aa16.52■□□□□ 0.24
CSRP1-201ENST00000340006 ZNF302Q9NR11 478 aa16.52■□□□□ 0.24
CSRP1-201ENST00000340006 DDX19AQ9NUU7 478 aaKnown RBP16.52■□□□□ 0.24
CSRP1-201ENST00000340006 DNM3Q9UQ16 869 aa16.52■□□□□ 0.24
CSRP1-201ENST00000340006 KDM3AQ9Y4C1 1321 aa16.52■□□□□ 0.23
CSRP1-201ENST00000340006 WDR81Q562E7 1941 aa16.52■□□□□ 0.23
CSRP1-201ENST00000340006 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 POTEB3A0JP26 581 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 C6orf222P0C671 652 aaPredicted RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 PLCG1P19174 1290 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 CPT1AP50416 773 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 STAT5BP51692 787 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 PSMC5P62195 406 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 ECM1Q16610 540 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 DGKDQ16760 1214 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 FAM160B1Q5W0V3 765 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 FBXO46Q6PJ61 603 aaPredicted RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 POTEBQ6S5H4 581 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 NEK9Q8TD19 979 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 ATP6V0A1Q93050 837 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 LXNQ9BS40 222 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 DACT1Q9NYF0 836 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 HPSEQ9Y251 543 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 POTEFA5A3E0 1075 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 DKC1O60832 514 aaKnown RBP eCLIP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 KINO60870 393 aaKnown RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 PGK1P00558 417 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 GRB10Q13322 594 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 SNW1Q13573 536 aaKnown RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 DHX8Q14562 1220 aaKnown RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 LONRF3Q496Y0 759 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 GNASQ5JWF2 1037 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 PDXDC2PQ6P474 469 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 POTEGQ6S5H5 508 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 SYAP1Q96A49 352 aaPredicted RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 NACC1Q96RE7 527 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 XPNPEP3Q9NQH7 507 aa16.51■□□□□ 0.23
CSRP1-201ENST00000340006 DDX20Q9UHI6 824 aaKnown RBP16.51■□□□□ 0.23
CSRP1-201ENST00000340006 A0A087X0B3 334 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 CHMP4BP1P59074 171 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 BEX3Q00994 111 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 CCDC60Q8IWA6 550 aaPredicted RBP16.5■□□□□ 0.23
CSRP1-201ENST00000340006 CNNM3Q8NE01 707 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 ENGASEQ8NFI3 743 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 PIGOQ8TEQ8 1089 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 PNMA5Q96PV4 448 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 SMARCAD1Q9H4L7 1026 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 SERTAD1Q9UHV2 236 aa16.5■□□□□ 0.23
CSRP1-201ENST00000340006 FAM237AA0A1B0GTK4 181 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 E9PMD0 336 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 SLC26A4O43511 780 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 MSCO60682 206 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 SSBP05455 408 aaKnown RBP eCLIP16.49■□□□□ 0.23
CSRP1-201ENST00000340006 MMP3P08254 477 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 PSMC6P62333 389 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 IRX5P78411 483 aaPredicted RBP16.49■□□□□ 0.23
CSRP1-201ENST00000340006 FSCN1Q16658 493 aaKnown RBP16.49■□□□□ 0.23
CSRP1-201ENST00000340006 RNF208Q9H0X6 261 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 A6NJR5 290 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 ZBTB39O15060 712 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 MYL3P08590 195 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 MUTP22033 750 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 GJA9P57773 515 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 UGCGQ16739 394 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 HYIQ5T013 277 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 CCDC34Q96HJ3 373 aa16.49■□□□□ 0.23
CSRP1-201ENST00000340006 UNC93B1Q9H1C4 597 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms