RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 TMTC1Q8IUR5 882 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 SIK3Q9Y2K2 1263 aa17.1■□□□□ 0.33
MBD1-203ENST00000339998 EPN1Q9Y6I3 576 aaPredicted RBP17.1■□□□□ 0.33
MBD1-203ENST00000339998 TESPA1A2RU30 521 aaPredicted RBP17.09■□□□□ 0.33
MBD1-203ENST00000339998 ADM5C9JUS6 153 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 NR2F2P24468 414 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 SP4Q02446 784 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 KCNMA1Q12791 1236 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 MAN2A1Q16706 1144 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 TKFCQ3LXA3 575 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 MYCT1Q8N699 235 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 KLRG1Q96E93 195 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 RMDN3Q96TC7 470 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 DNAJC7Q99615 494 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 ZSWIM4Q9H7M6 989 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 COL4A3BPQ9Y5P4 624 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 ZNF569Q5MCW4 686 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 SNRNP48Q6IEG0 339 aaKnown RBP17.09■□□□□ 0.33
MBD1-203ENST00000339998 MOB2Q70IA6 237 aa17.09■□□□□ 0.33
MBD1-203ENST00000339998 NAA15Q9BXJ9 866 aaKnown RBP17.09■□□□□ 0.33
MBD1-203ENST00000339998 SSC5DA1L4H1 1573 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 KIF2AO00139 706 aaPredicted RBP17.08■□□□□ 0.33
MBD1-203ENST00000339998 TULP1O00294 542 aaPredicted RBP17.08■□□□□ 0.33
MBD1-203ENST00000339998 DHX15O43143 795 aaKnown RBP17.08■□□□□ 0.33
MBD1-203ENST00000339998 CCP110O43303 1012 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 NDUFA10O95299 355 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 PPP1R2P41236 205 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 TRAF1Q13077 416 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 DCAF15Q66K64 600 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 RNF207Q6ZRF8 634 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 CARD6Q9BX69 1037 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 TEKT3Q9BXF9 490 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 RNF146Q9NTX7 359 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 DUSP10Q9Y6W6 482 aa17.08■□□□□ 0.33
MBD1-203ENST00000339998 RCCD1A6NED2 376 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 TBCAO75347 108 aaKnown RBP17.08■□□□□ 0.32
MBD1-203ENST00000339998 FECHP22830 423 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 CASQ1P31415 396 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 ARHGAP25P42331 645 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 ENOX2Q16206 610 aaKnown RBP17.08■□□□□ 0.32
MBD1-203ENST00000339998 UTP14CQ5TAP6 766 aaKnown RBP17.08■□□□□ 0.32
MBD1-203ENST00000339998 C1orf186Q6ZWK4 172 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 CCDC51Q96ER9 411 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 ERGIC2Q96RQ1 377 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 L2HGDHQ9H9P8 463 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 GUCA1BQ9UMX6 200 aa17.08■□□□□ 0.32
MBD1-203ENST00000339998 FAM170AA1A519 330 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 SLU7O95391 586 aaKnown RBP17.07■□□□□ 0.32
MBD1-203ENST00000339998 MTMR1Q13613 665 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 TMEM132BQ14DG7 1078 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 PGM5Q15124 567 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 UGCGQ16739 394 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 ZBED4O75132 1171 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 TRIM14Q14142 442 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 ARHGAP29Q52LW3 1261 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 RRAGAQ7L523 313 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 MIER3Q7Z3K6 550 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 SLC35F6Q8N357 371 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 ZNF112Q9UJU3 913 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 COL11A1P12107 1806 aaPredicted RBP17.07■□□□□ 0.32
MBD1-203ENST00000339998 FAM13AO94988 1023 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 LMNB1P20700 586 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 HERVK_113P62684 666 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 HSP90AA2PQ14568 343 aaPredicted RBP17.07■□□□□ 0.32
MBD1-203ENST00000339998 B3GNT9Q6UX72 402 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 PHLPP2Q6ZVD8 1323 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 RPTORQ8N122 1335 aa17.07■□□□□ 0.32
MBD1-203ENST00000339998 TISP43B9A030 160 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 ACTN1P12814 892 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 KNOP1Q1ED39 458 aaKnown RBP17.06■□□□□ 0.32
MBD1-203ENST00000339998 R3HDMLQ9H3Y0 253 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 EHMT1Q9H9B1 1298 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 NHEJ1Q9H9Q4 299 aaPredicted RBP17.06■□□□□ 0.32
MBD1-203ENST00000339998 PCDHB13Q9Y5F0 798 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 RBBP6Q7Z6E9 1792 aaKnown RBP17.06■□□□□ 0.32
MBD1-203ENST00000339998 LRRC53A6NM62 1247 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 AKAP3O75969 853 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 FSTL1Q12841 308 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 ARHGEF16Q5VV41 709 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 GPC2Q8N158 579 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 PDCD2LQ9BRP1 358 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 LACRTQ9GZZ8 138 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 AGO4Q9HCK5 861 aaKnown RBP17.06■□□□□ 0.32
MBD1-203ENST00000339998 RNF181Q9P0P0 153 aa17.06■□□□□ 0.32
MBD1-203ENST00000339998 ZNF263O14978 683 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 USP2O75604 605 aaPredicted RBP17.05■□□□□ 0.32
MBD1-203ENST00000339998 ARID5AQ03989 594 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 TSR1Q2NL82 804 aaKnown RBP17.05■□□□□ 0.32
MBD1-203ENST00000339998 TREML2Q5T2D2 321 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
MBD1-203ENST00000339998 APOBEC3FQ8IUX4 373 aaKnown RBP17.05■□□□□ 0.32
MBD1-203ENST00000339998 TUFT1Q9NNX1 390 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 ZNF214Q9UL59 606 aaPredicted RBP17.05■□□□□ 0.32
MBD1-203ENST00000339998 ASTN1O14525 1302 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 USP14P54578 494 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 ZBED6P86452 979 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 EPHA7Q15375 998 aa17.05■□□□□ 0.32
MBD1-203ENST00000339998 DCAF17Q5H9S7 520 aaPredicted RBP17.05■□□□□ 0.32
MBD1-203ENST00000339998 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms