RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 OGFOD1Q8N543 542 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 ZNF384Q8TF68 577 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 EHMT1Q9H9B1 1298 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 DAGLAQ9Y4D2 1042 aa12.09□□□□□ -0.47
SEMA4D-201ENST00000339861 ARHGAP4P98171 946 aa12.08□□□□□ -0.47
SEMA4D-201ENST00000339861 SLFN12Q8IYM2 578 aa12.08□□□□□ -0.47
SEMA4D-201ENST00000339861 ZIM3Q96PE6 472 aa12.08□□□□□ -0.47
SEMA4D-201ENST00000339861 TNS2Q63HR2 1409 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 PPEF1O14829 653 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 TRIM37O94972 964 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 DLATP10515 647 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 NMT1P30419 496 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 IRAK1P51617 712 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 BIRC3Q13489 604 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 HOOK2Q96ED9 719 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 RAB21Q9UL25 225 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 SCAF8Q9UPN6 1271 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 SNX24Q9Y343 169 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 DAPK3O43293 454 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 PBX1P40424 430 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 TRIP13Q15645 432 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 MIGA2Q7L4E1 593 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 DPH6Q7L8W6 267 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 APTXQ7Z2E3 356 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 MAGOHBQ96A72 148 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 BAIAP2L1Q9UHR4 511 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 LRRC10BA6NIK2 292 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 MAP2K7O14733 419 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 KLRC4O43908 158 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 GH2P01242 217 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 MAGEA9P43362 315 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 NPY5RQ15761 445 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 DENND2CQ68D51 928 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 NAP1L4Q99733 375 aaKnown RBP12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 TCHPQ9BT92 498 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 JMJD4Q9H9V9 463 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 CD2APQ9Y5K6 639 aa12.08□□□□□ -0.48
SEMA4D-201ENST00000339861 SPATA31A1Q5TZJ5 1347 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 RGS16O15492 202 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 NR3C1P04150 777 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 MYBP10242 640 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 PSMD2Q13200 908 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 OTUD6AQ7L8S5 288 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 TADA2BQ86TJ2 420 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 ERGIC2Q96RQ1 377 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 CSRNP1Q96S65 589 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 CELF4Q9BZC1 486 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 MLXIPLQ9NP71 852 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 SAMD15Q9P1V8 674 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 RSPH10B2B2RC85 870 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 RSPH10BP0C881 870 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 SYCE1Q8N0S2 351 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 ANKS4BQ8N8V4 417 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 TNFRSF25Q93038 417 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 UBE2TQ9NPD8 197 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 A0A087WUV0 522 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 RAD51CO43502 376 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 PTK2Q05397 1052 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 E2F5Q15329 346 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 ZC2HC1CQ53FD0 456 aaPredicted RBP12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 WDR78Q5VTH9 848 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 TDRD3Q9H7E2 651 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 TMOD4Q9NZQ9 345 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
SEMA4D-201ENST00000339861 GLI1P08151 1106 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 GBP2P32456 591 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 EFCAB13Q8IY85 973 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 UBL4BQ8N7F7 174 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 TARSL2A2RTX5 802 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 NKRFO15226 690 aaKnown RBP eCLIP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 ALAS1P13196 640 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 GCFC2P16383 781 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 TMOD1P28289 359 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 ZNF543Q08ER8 600 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 PRR5LQ6MZQ0 368 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 WDR93Q6P2C0 686 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 C16orf86Q6ZW13 317 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 DHX36Q9H2U1 1008 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 DNAJC12Q9UKB3 198 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 MED1Q15648 1581 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 KDM3BQ7LBC6 1761 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 CTNND1O60716 968 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 NFIAQ12857 509 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 ZKSCAN8Q15776 578 aaPredicted RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 FAM102BQ5T8I3 360 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 ALS2CLQ60I27 953 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 TRIM51Q9BSJ1 452 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 DAAM1Q9Y4D1 1078 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 SART1O43290 800 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 FAM153BP0C7A2 387 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 MYL7Q01449 175 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 KNOP1Q1ED39 458 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 FAM153CQ494X1 144 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 CACNA2D3Q8IZS8 1091 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 BANK1Q8NDB2 785 aa12.06□□□□□ -0.48
SEMA4D-201ENST00000339861 TBC1D16Q8TBP0 767 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms