RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 TNNI3KQ59H18 835 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 TMCO4Q5TGY1 634 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 MAMDC4Q6UXC1 1216 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 RSPO2Q6UXX9 243 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-202ENST00000338635 NEU4Q8WWR8 484 aaPredicted RBP4.31□□□□□ -1.72
XRCC4-202ENST00000338635 FAM89AQ96GI7 184 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 DPYSL5Q9BPU6 564 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 IER2Q9BTL4 223 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 TGIF2Q9GZN2 237 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 C12orf65Q9H3J6 166 aaKnown RBP4.31□□□□□ -1.72
XRCC4-202ENST00000338635 DSEQ9UL01 958 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 OAZ3Q9UMX2 235 aa4.31□□□□□ -1.72
XRCC4-202ENST00000338635 A0A087X1B8 175 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 A0A1W2PQU0 124 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 ACOT7O00154 380 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 AGRPO00253 132 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 CDC14BO60729 498 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 GRK2P25098 689 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 GRK3P35626 688 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 RRADP55042 308 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 INHBCP55103 352 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 TOP3AQ13472 1001 aaPredicted RBP4.3□□□□□ -1.72
XRCC4-202ENST00000338635 LBX2Q6XYB7 198 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 EEPD1Q7L9B9 569 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 IL17DQ8TAD2 202 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 OR14A2Q96R54 314 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 SLC39A2Q9NP94 309 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 SLC30A1Q9Y6M5 507 aa4.3□□□□□ -1.72
XRCC4-202ENST00000338635 CUTAO60888 179 aa4.29□□□□□ -1.72
XRCC4-202ENST00000338635 SSBP05455 408 aaKnown RBP eCLIP4.29□□□□□ -1.72
XRCC4-202ENST00000338635 EPHA5P54756 1037 aa4.29□□□□□ -1.72
XRCC4-202ENST00000338635 ZMAT1Q5H9K5 638 aa4.29□□□□□ -1.72
XRCC4-202ENST00000338635 HABP4Q5JVS0 413 aaKnown RBP4.29□□□□□ -1.72
XRCC4-202ENST00000338635 KCNT2Q6UVM3 1135 aa4.29□□□□□ -1.72
XRCC4-202ENST00000338635 DPP8Q6V1X1 898 aaPredicted RBP4.29□□□□□ -1.72
XRCC4-202ENST00000338635 KCTD1Q719H9 257 aa4.29□□□□□ -1.72
XRCC4-202ENST00000338635 EPN3Q9H201 632 aa4.29□□□□□ -1.72
XRCC4-202ENST00000338635 NR2E1Q9Y466 385 aa4.29□□□□□ -1.72
XRCC4-202ENST00000338635 MATN2O00339 956 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 GJB6O95452 261 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 ETFBP38117 255 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 NANOS3P60323 173 aaKnown RBP4.28□□□□□ -1.72
XRCC4-202ENST00000338635 KIZQ2M2Z5 673 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 SLC10A6Q3KNW5 377 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 ZNF808Q8N4W9 903 aaPredicted RBP4.28□□□□□ -1.72
XRCC4-202ENST00000338635 CACTINQ8WUQ7 758 aaKnown RBP4.28□□□□□ -1.72
XRCC4-202ENST00000338635 DCAF4Q8WV16 495 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 SCYL1Q96KG9 808 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 PLA2G12BQ9BX93 195 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 PRKAG3Q9UGI9 489 aa4.28□□□□□ -1.72
XRCC4-202ENST00000338635 U2SURPO15042 1029 aaKnown RBP4.27□□□□□ -1.73
XRCC4-202ENST00000338635 ACRV1P26436 265 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 KRTAP10-9P60411 292 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 DBPQ10586 325 aaPredicted RBP4.27□□□□□ -1.73
XRCC4-202ENST00000338635 DUSP8Q13202 625 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 TUBA3CQ13748 450 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 FNDC7Q5VTL7 733 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 TUBA3EQ6PEY2 450 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 CCSER2Q9H7U1 834 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 MMRN2Q9H8L6 949 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 HIBADHP31937 336 aaKnown RBP4.27□□□□□ -1.73
XRCC4-202ENST00000338635 RPS19P39019 145 aaKnown RBP4.27□□□□□ -1.73
XRCC4-202ENST00000338635 FOXL1Q12952 345 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 HSP90AA2PQ14568 343 aaPredicted RBP4.27□□□□□ -1.73
XRCC4-202ENST00000338635 TBR1Q16650 682 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 WDR72Q3MJ13 1102 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 BTBD8Q5XKL5 378 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 VPS37DQ86XT2 251 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 DNAJC10Q8IXB1 793 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 LARP4BQ92615 738 aaKnown RBP4.27□□□□□ -1.73
XRCC4-202ENST00000338635 CD244Q9BZW8 370 aa4.27□□□□□ -1.73
XRCC4-202ENST00000338635 PUF60Q9UHX1 559 aaKnown RBP4.27□□□□□ -1.73
XRCC4-202ENST00000338635 FAM47E-STBD1D6RA91 191 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 ARHGAP6O43182 974 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 PRODHO43272 600 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 SOD2P04179 222 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 ADH4P08319 380 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 LMO1P25800 156 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 MSX2P35548 267 aaPredicted RBP4.26□□□□□ -1.73
XRCC4-202ENST00000338635 ETV4P43268 484 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 GPR85P60893 370 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 NFYCQ13952 458 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 LDLRAD3Q86YD5 345 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 IFNL3Q8IZI9 196 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 ZG16BQ96DA0 208 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 ZFYVE21Q9BQ24 234 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 ZDHHC5Q9C0B5 715 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 CAPN10Q9HC96 672 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 TLR9Q9NR96 1032 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 PLA2G3Q9NZ20 509 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 ARHGAP28Q9P2N2 729 aa4.26□□□□□ -1.73
XRCC4-202ENST00000338635 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.25□□□□□ -1.73
XRCC4-202ENST00000338635 KCNQ1P51787 676 aa4.25□□□□□ -1.73
XRCC4-202ENST00000338635 MFAP1P55081 439 aaKnown RBP4.25□□□□□ -1.73
XRCC4-202ENST00000338635 NTRK3Q16288 839 aa4.25□□□□□ -1.73
XRCC4-202ENST00000338635 LARP4Q71RC2 724 aaKnown RBP eCLIP4.25□□□□□ -1.73
XRCC4-202ENST00000338635 SGMS1Q86VZ5 419 aa4.25□□□□□ -1.73
XRCC4-202ENST00000338635 SH3RF2Q8TEC5 729 aa4.25□□□□□ -1.73
XRCC4-202ENST00000338635 ZNF483Q8TF39 744 aaPredicted RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms