RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 TET1Q8NFU7 2136 aa17.33■□□□□ 0.37
PRKN-201ENST00000338468 IGKV6D-21A0A0A0MT36 114 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 DDX39AO00148 427 aaKnown RBP17.33■□□□□ 0.36
PRKN-201ENST00000338468 FGBP02675 491 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 SELPP16109 830 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 MARK3P27448 753 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 RFC2P35250 354 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 SETQ01105 290 aaPredicted RBP17.33■□□□□ 0.36
PRKN-201ENST00000338468 ABHD15Q6UXT9 468 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 LRRC8DQ7L1W4 858 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 OTOP2Q7RTS6 562 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 DEFB128Q7Z7B8 93 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.36
PRKN-201ENST00000338468 PPM1EQ8WY54 764 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 ATP6V0A1Q93050 837 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 ZNF577Q9BSK1 485 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 PBX4Q9BYU1 374 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 SMARCAD1Q9H4L7 1026 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 ERAP1Q9NZ08 941 aa17.33■□□□□ 0.36
PRKN-201ENST00000338468 CYP3A7-CYP3A51PA0A087WV96 503 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 MSH4O15457 936 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 NBNO60934 754 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 CYP3A7P24462 503 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 MBTPS1Q14703 1052 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 CCDC155Q8N6L0 562 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 GLG1Q92896 1179 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 MBOAT7Q96N66 472 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 PRDM12Q9H4Q4 367 aa17.32■□□□□ 0.36
PRKN-201ENST00000338468 NRCAMQ92823 1304 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 GRXCR1A8MXD5 290 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 TDP2O95551 362 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 PFKMP08237 780 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 PBX2P40425 430 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 TCTN1Q2MV58 587 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 EARS2Q5JPH6 523 aaKnown RBP17.31■□□□□ 0.36
PRKN-201ENST00000338468 MARCH8Q5T0T0 291 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 PLPPR4Q7Z2D5 763 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 KRT25Q7Z3Z0 450 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 CCDC83Q8IWF9 413 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 IL27Q8NEV9 243 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 WASF1Q92558 559 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 TNFRSF25Q93038 417 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 GJA10Q969M2 543 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 ASB2Q96Q27 587 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 TBC1D22BQ9NU19 505 aa17.31■□□□□ 0.36
PRKN-201ENST00000338468 CHD9Q3L8U1 2897 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 CXCL10P02778 98 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 GNAT1P11488 350 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 XBP1P17861 261 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 THPOP40225 353 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 STAT5BP51692 787 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 PPFIA1Q13136 1202 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 PLCB4Q15147 1175 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 NONOQ15233 471 aaKnown RBP eCLIP17.3■□□□□ 0.36
PRKN-201ENST00000338468 RAB30Q15771 203 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 GRIK4Q16099 956 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 INF2Q27J81 1249 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 Q4G0T1 1027 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 RUFY4Q6ZNE9 571 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 CCDC60Q8IWA6 550 aaPredicted RBP17.3■□□□□ 0.36
PRKN-201ENST00000338468 ADAMTS19Q8TE59 1207 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 SLC5A5Q92911 643 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 OSBPL7Q9BZF2 842 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 MTIF3Q9H2K0 278 aaKnown RBP17.3■□□□□ 0.36
PRKN-201ENST00000338468 MSRAQ9UJ68 235 aa17.3■□□□□ 0.36
PRKN-201ENST00000338468 MBLAC1A4D2B0 266 aaPredicted RBP17.29■□□□□ 0.36
PRKN-201ENST00000338468 FAM205CA6NFA0 338 aa17.29■□□□□ 0.36
PRKN-201ENST00000338468 INSRRP14616 1297 aa17.29■□□□□ 0.36
PRKN-201ENST00000338468 MRPS5P82675 430 aaKnown RBP17.29■□□□□ 0.36
PRKN-201ENST00000338468 NR5A1Q13285 461 aa17.29■□□□□ 0.36
PRKN-201ENST00000338468 ZNF746Q6NUN9 644 aaPredicted RBP17.29■□□□□ 0.36
PRKN-201ENST00000338468 MOXD1Q6UVY6 613 aa17.29■□□□□ 0.36
PRKN-201ENST00000338468 ETNPPLQ8TBG4 499 aa17.29■□□□□ 0.36
PRKN-201ENST00000338468 ZBTB10Q96DT7 871 aa17.29■□□□□ 0.36
PRKN-201ENST00000338468 AZI2Q9H6S1 392 aa17.29■□□□□ 0.36
PRKN-201ENST00000338468 SLC37A4O43826 429 aa17.28■□□□□ 0.36
PRKN-201ENST00000338468 ATP4AP20648 1035 aa17.28■□□□□ 0.36
PRKN-201ENST00000338468 KRT76Q01546 638 aa17.28■□□□□ 0.36
PRKN-201ENST00000338468 RABEP1Q15276 862 aa17.28■□□□□ 0.36
PRKN-201ENST00000338468 PIK3AP1Q6ZUJ8 805 aa17.28■□□□□ 0.36
PRKN-201ENST00000338468 ZSCAN31Q96LW9 406 aaPredicted RBP17.28■□□□□ 0.36
PRKN-201ENST00000338468 TBC1D32Q96NH3 1257 aa17.28■□□□□ 0.36
PRKN-201ENST00000338468 UHRF1Q96T88 793 aaPredicted RBP17.28■□□□□ 0.36
PRKN-201ENST00000338468 FTOQ9C0B1 505 aaKnown RBP eCLIP17.28■□□□□ 0.36
PRKN-201ENST00000338468 BDP1A6H8Y1 2624 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 NCOR1O75376 2440 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 KAT6AQ92794 2004 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 CCDC194A0A1B0GVG4 234 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 RSPH10B2B2RC85 870 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 PSMD10O75832 226 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 CD2BP2O95400 341 aaKnown RBP17.27■□□□□ 0.36
PRKN-201ENST00000338468 PARNO95453 639 aaKnown RBP17.27■□□□□ 0.36
PRKN-201ENST00000338468 MMP1P03956 469 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 RSPH10BP0C881 870 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 IGFBP4P22692 258 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 KRT2P35908 639 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 FOSBP53539 338 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 IGBP1P78318 339 aa17.27■□□□□ 0.36
PRKN-201ENST00000338468 CCDC85BQ15834 202 aaPredicted RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms