RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 RIC8AQ9NPQ8 531 aa12.19□□□□□ -0.46
CAPN3-202ENST00000337571 TCF20Q9UGU0 1960 aaKnown RBP12.18□□□□□ -0.46
CAPN3-202ENST00000337571 CCDC196A0A1B0GTZ2 297 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 RPLP2P05387 115 aaKnown RBP12.18□□□□□ -0.46
CAPN3-202ENST00000337571 BMP1P13497 986 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 MARK3P27448 753 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 ADCY7P51828 1080 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 EXOSC10Q01780 885 aaKnown RBP12.18□□□□□ -0.46
CAPN3-202ENST00000337571 GRIK4Q16099 956 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 PTPROQ16827 1216 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 TSGA10IPQ3SY00 556 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 PPP1R18Q6NYC8 613 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 FBXO22Q8NEZ5 403 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 TOP1MTQ969P6 601 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 SAMD11Q96NU1 681 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 MXRA8Q9BRK3 442 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 JPH1Q9HDC5 661 aaPredicted RBP12.18□□□□□ -0.46
CAPN3-202ENST00000337571 KCNH7Q9NS40 1196 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 SLC9A2Q9UBY0 812 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 TUBE1Q9UJT0 475 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 TELO2Q9Y4R8 837 aa12.18□□□□□ -0.46
CAPN3-202ENST00000337571 MUC3AQ02505 3323 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 MICAL3Q7RTP6 2002 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 KLF18A0A0U1RQI7 1052 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 RRN3P2A6NIE6 340 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 GOLGA8BA8MQT2 603 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 hCG_1984214I3L0E3 225 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 LPXNO60711 386 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 KCNQ1P51787 676 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 IGBP1P78318 339 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 ADAM17P78536 824 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 HTRA4P83105 476 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-202ENST00000337571 COL9A3Q14050 684 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-202ENST00000337571 IER5Q5VY09 327 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 WWC2Q6AWC2 1192 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 SPRED2Q7Z698 418 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 ZNF713Q8N859 430 aaPredicted RBP12.17□□□□□ -0.46
CAPN3-202ENST00000337571 TCEANC2Q96MN5 208 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 BRPF3Q9ULD4 1205 aa12.17□□□□□ -0.46
CAPN3-202ENST00000337571 SIP14410 1827 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 M0QZ92 97 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 CHRNA1P02708 482 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 PSEN1P49768 467 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 EPC2Q52LR7 807 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 CEP55Q53EZ4 464 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 MCTP2Q6DN12 878 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-202ENST00000337571 DNAJB3Q8WWF6 145 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 RNF25Q96BH1 459 aaPredicted RBP12.16□□□□□ -0.46
CAPN3-202ENST00000337571 IL17RAQ96F46 866 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 C17orf80Q9BSJ5 609 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CAPN3-202ENST00000337571 PRRC2BQ5JSZ5 2229 aaKnown RBP12.16□□□□□ -0.46
CAPN3-202ENST00000337571 NFASCO94856 1347 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 STXBP3O00186 592 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 GHRP10912 638 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 INSRRP14616 1297 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 METAP2P50579 478 aaKnown RBP eCLIP12.15□□□□□ -0.46
CAPN3-202ENST00000337571 STAT5BP51692 787 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 RCAN1P53805 252 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 ACTR2P61160 394 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 AKAP17AQ02040 695 aaKnown RBP12.15□□□□□ -0.46
CAPN3-202ENST00000337571 AP3B2Q13367 1082 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 GPM6BQ13491 265 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 ADCK5Q3MIX3 580 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 RUFY4Q6ZNE9 571 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 Q6ZUG5 572 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 PLPPR4Q7Z2D5 763 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 SKAP1Q86WV1 359 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 TMEM192Q8IY95 271 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 FIBCD1Q8N539 461 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 CYP2W1Q8TAV3 490 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 CCDC136Q96JN2 1154 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 PGBD1Q96JS3 809 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 ANO3Q9BYT9 981 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 AGO4Q9HCK5 861 aaKnown RBP12.15□□□□□ -0.46
CAPN3-202ENST00000337571 C6orf50Q9HD87 102 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
CAPN3-202ENST00000337571 COL4A4P53420 1690 aaPredicted RBP12.15□□□□□ -0.46
CAPN3-202ENST00000337571 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-202ENST00000337571 MBLAC1A4D2B0 266 aaPredicted RBP12.14□□□□□ -0.47
CAPN3-202ENST00000337571 H3BNC9 293 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 MEIS1O00470 390 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 ENPP3O14638 875 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 BACH1O14867 736 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 ARP10275 920 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 SLC26A2P50443 739 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 MRPS6P82932 125 aaKnown RBP12.14□□□□□ -0.47
CAPN3-202ENST00000337571 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
CAPN3-202ENST00000337571 LPIN1Q14693 890 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 MARCH8Q5T0T0 291 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 FAM160B1Q5W0V3 765 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 BLOC1S2Q6QNY1 142 aa12.14□□□□□ -0.47
CAPN3-202ENST00000337571 TSHZ1Q6ZSZ6 1077 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms