RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
LIPA-202ENST00000336233 SALL4Q9UJQ4 1053 aa15.69■□□□□ 0.1
LIPA-202ENST00000336233 HPCAL4Q9UM19 191 aa15.69■□□□□ 0.1
LIPA-202ENST00000336233 ATP8B3O60423 1300 aa15.69■□□□□ 0.1
LIPA-202ENST00000336233 PSEN1P49768 467 aa15.69■□□□□ 0.1
LIPA-202ENST00000336233 POLR2FP61218 127 aaKnown RBP15.69■□□□□ 0.1
LIPA-202ENST00000336233 CACNB1Q02641 598 aaPredicted RBP15.69■□□□□ 0.1
LIPA-202ENST00000336233 MUM1L1Q5H9M0 696 aa15.69■□□□□ 0.1
LIPA-202ENST00000336233 RNF14Q9UBS8 474 aa15.69■□□□□ 0.1
LIPA-202ENST00000336233 RBBP6Q7Z6E9 1792 aaKnown RBP15.68■□□□□ 0.1
LIPA-202ENST00000336233 BTNL10A8MVZ5 291 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 PDXKO00764 312 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 MSH4O15457 936 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 NAB2Q15742 525 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 SLC18A3Q16572 532 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 KNOP1Q1ED39 458 aaKnown RBP15.68■□□□□ 0.1
LIPA-202ENST00000336233 TDRD12Q587J7 1177 aaKnown RBP15.68■□□□□ 0.1
LIPA-202ENST00000336233 HSP90B2PQ58FF3 399 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 KLHDC7AQ5VTJ3 777 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 SPATA4Q8NEY3 305 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 AENQ8WTP8 325 aaKnown RBP15.68■□□□□ 0.1
LIPA-202ENST00000336233 REEP2Q9BRK0 252 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 TLR10Q9BXR5 811 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 NLRC4Q9NPP4 1024 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 VPS18Q9P253 973 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 SLC16A3O15427 465 aaKnown RBP15.68■□□□□ 0.1
LIPA-202ENST00000336233 RAD21O60216 631 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 N4BP1O75113 896 aaKnown RBP15.68■□□□□ 0.1
LIPA-202ENST00000336233 GDF11O95390 407 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 NR2F2P24468 414 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 TNFRSF8P28908 595 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 HOXD13P35453 343 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 CASP5P51878 434 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 RBM5P52756 815 aaKnown RBP eCLIP15.68■□□□□ 0.1
LIPA-202ENST00000336233 PSMC6P62333 389 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 RASSF7Q02833 373 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 TRAF1Q13077 416 aa15.68■□□□□ 0.1
LIPA-202ENST00000336233 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.1
LIPA-202ENST00000336233 CALUO43852 315 aaPredicted RBP15.67■□□□□ 0.1
LIPA-202ENST00000336233 KCNH2Q12809 1159 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
LIPA-202ENST00000336233 NFRKBQ6P4R8 1299 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 SFR1Q86XK3 245 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 HDAC9Q9UKV0 1011 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 FAN1Q9Y2M0 1017 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 CLGNO14967 610 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 EYA4O95677 639 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 ANXA13P27216 316 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 FBXL5Q9UKA1 691 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 PCDHGC5Q9Y5F6 944 aa15.67■□□□□ 0.1
LIPA-202ENST00000336233 ERCC3P19447 782 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 JAG1P78504 1218 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 PABPC4Q13310 644 aaKnown RBP eCLIP15.66■□□□□ 0.1
LIPA-202ENST00000336233 ASIC2Q16515 512 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 C10orf76Q5T2E6 689 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 TYW1Q9NV66 732 aaKnown RBP15.66■□□□□ 0.1
LIPA-202ENST00000336233 IGLV3-22A0A075B6J6 115 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 GH2P01242 217 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 GAP43P17677 238 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 GYS2P54840 703 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 SLC15A2Q16348 729 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 NFIL3Q16649 462 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 USH1GQ495M9 461 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 SELENOOQ9BVL4 669 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 OLFML3Q9NRN5 406 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 ARMCX3Q9UH62 379 aaPredicted RBP15.66■□□□□ 0.1
LIPA-202ENST00000336233 HERC5Q9UII4 1024 aaKnown RBP15.66■□□□□ 0.1
LIPA-202ENST00000336233 RGPD3A6NKT7 1758 aaPredicted RBP15.66■□□□□ 0.1
LIPA-202ENST00000336233 RGPD4Q7Z3J3 1758 aa15.66■□□□□ 0.1
LIPA-202ENST00000336233 AFPP02771 609 aaKnown RBP15.65■□□□□ 0.1
LIPA-202ENST00000336233 EPS15P42566 896 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 SNAP25P60880 206 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 RAD51AP2Q09MP3 1159 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 RAPGEF1Q13905 1077 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 GLE1Q53GS7 698 aaKnown RBP15.65■□□□□ 0.1
LIPA-202ENST00000336233 CCDC102AQ96A19 550 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 DRC1Q96MC2 740 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 UIMC1Q96RL1 719 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 METTL14Q9HCE5 456 aaKnown RBP15.65■□□□□ 0.1
LIPA-202ENST00000336233 TUFT1Q9NNX1 390 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 PRR12Q9ULL5 1215 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 BZW2Q9Y6E2 419 aaKnown RBP15.65■□□□□ 0.1
LIPA-202ENST00000336233 MYH10P35580 1976 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 H0YIN7 160 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 SYF2O95926 243 aaKnown RBP15.65■□□□□ 0.1
LIPA-202ENST00000336233 MYBL2P10244 700 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 TNNT3P45378 269 aaPredicted RBP15.65■□□□□ 0.1
LIPA-202ENST00000336233 KLHL30Q0D2K2 578 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 CC2D2BQ6DHV5 1058 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 EIF2AK1Q9BQI3 630 aaKnown RBP15.65■□□□□ 0.1
LIPA-202ENST00000336233 CRACR2AQ9BSW2 395 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 ASTN1O14525 1302 aa15.65■□□□□ 0.1
LIPA-202ENST00000336233 A0A1W2PRG0 241 aa15.64■□□□□ 0.09
LIPA-202ENST00000336233 GRID2IPA4D2P6 1211 aa15.64■□□□□ 0.09
LIPA-202ENST00000336233 MEIS1O00470 390 aa15.64■□□□□ 0.09
LIPA-202ENST00000336233 EIF3DO15371 548 aaKnown RBP eCLIP15.64■□□□□ 0.09
LIPA-202ENST00000336233 RPS6KA5O75582 802 aa15.64■□□□□ 0.09
LIPA-202ENST00000336233 PRPF6O94906 941 aaKnown RBP15.64■□□□□ 0.09
LIPA-202ENST00000336233 MUTP22033 750 aa15.64■□□□□ 0.09
LIPA-202ENST00000336233 PAFAH1B1P43034 410 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms