RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 KRBA2Q6ZNG9 492 aa24.11■■□□□ 1.45
TPM1-204ENST00000334895 EMID1Q96A84 441 aaPredicted RBP24.11■■□□□ 1.45
TPM1-204ENST00000334895 GPR20Q99678 358 aa24.11■■□□□ 1.45
TPM1-204ENST00000334895 TUFT1Q9NNX1 390 aa24.11■■□□□ 1.45
TPM1-204ENST00000334895 DDX19AQ9NUU7 478 aaKnown RBP24.11■■□□□ 1.45
TPM1-204ENST00000334895 KIAA1024Q9UPX6 916 aa24.11■■□□□ 1.45
TPM1-204ENST00000334895 NKRFO15226 690 aaKnown RBP eCLIP24.1■■□□□ 1.45
TPM1-204ENST00000334895 KINO60870 393 aaKnown RBP24.1■■□□□ 1.45
TPM1-204ENST00000334895 SUPT20HL2P0C7V6 817 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 PRKAR2AP13861 404 aaKnown RBP24.1■■□□□ 1.45
TPM1-204ENST00000334895 LAMC2Q13753 1193 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 MAP3K21Q5TCX8 1036 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 CAVIN1Q6NZI2 390 aaKnown RBP24.1■■□□□ 1.45
TPM1-204ENST00000334895 CCDC60Q8IWA6 550 aaPredicted RBP24.1■■□□□ 1.45
TPM1-204ENST00000334895 IQUBQ8NA54 791 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 NEK9Q8TD19 979 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 TIGD1Q96MW7 591 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 SPATA33Q96N06 139 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 LXNQ9BS40 222 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 BLOC1S4Q9NUP1 217 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 A0A087WWV3 80 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 IGKV6D-21A0A0A0MT36 114 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 P4HBP07237 508 aaKnown RBP24.1■■□□□ 1.45
TPM1-204ENST00000334895 STAT6P42226 847 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 TPH2Q8IWU9 490 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 CDK5RAP3Q96JB5 506 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 PCYT2Q99447 389 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 CLSTN2Q9H4D0 955 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 FAM184BQ9ULE4 1060 aa24.1■■□□□ 1.45
TPM1-204ENST00000334895 PSAPP07602 524 aa24.09■■□□□ 1.45
TPM1-204ENST00000334895 SLFN14P0C7P3 912 aa24.09■■□□□ 1.45
TPM1-204ENST00000334895 PSMC6P62333 389 aa24.09■■□□□ 1.45
TPM1-204ENST00000334895 MIS18BP1Q6P0N0 1132 aa24.09■■□□□ 1.45
TPM1-204ENST00000334895 SLAIN1Q8ND83 568 aa24.09■■□□□ 1.45
TPM1-204ENST00000334895 SEPT1Q8WYJ6 367 aa24.09■■□□□ 1.45
TPM1-204ENST00000334895 PYM1Q9BRP8 204 aaKnown RBP24.09■■□□□ 1.45
TPM1-204ENST00000334895 NT5C3AQ9H0P0 336 aa24.09■■□□□ 1.45
TPM1-204ENST00000334895 E9PMD0 336 aa24.08■■□□□ 1.45
TPM1-204ENST00000334895 AKR1A1P14550 325 aa24.08■■□□□ 1.45
TPM1-204ENST00000334895 CCND3P30281 292 aaPredicted RBP24.08■■□□□ 1.45
TPM1-204ENST00000334895 QARSP47897 775 aaKnown RBP24.08■■□□□ 1.45
TPM1-204ENST00000334895 SWSAP1Q6NVH7 229 aa24.08■■□□□ 1.45
TPM1-204ENST00000334895 AFG1LQ8WV93 481 aa24.08■■□□□ 1.45
TPM1-204ENST00000334895 MTRQ99707 1265 aa24.08■■□□□ 1.45
TPM1-204ENST00000334895 GABBR1Q9UBS5 961 aa24.08■■□□□ 1.45
TPM1-204ENST00000334895 IGSF9BQ9UPX0 1349 aa24.08■■□□□ 1.44
TPM1-204ENST00000334895 MUTP22033 750 aa24.07■■□□□ 1.44
TPM1-204ENST00000334895 TCF7P36402 384 aaPredicted RBP24.07■■□□□ 1.44
TPM1-204ENST00000334895 CAMK4Q16566 473 aa24.07■■□□□ 1.44
TPM1-204ENST00000334895 TNS4Q8IZW8 715 aa24.07■■□□□ 1.44
TPM1-204ENST00000334895 CNNM3Q8NE01 707 aa24.07■■□□□ 1.44
TPM1-204ENST00000334895 OR6J1Q8NGC5 347 aa24.07■■□□□ 1.44
TPM1-204ENST00000334895 PPTC7Q8NI37 304 aa24.07■■□□□ 1.44
TPM1-204ENST00000334895 STK17AQ9UEE5 414 aa24.07■■□□□ 1.44
TPM1-204ENST00000334895 USP25Q9UHP3 1055 aa24.07■■□□□ 1.44
TPM1-204ENST00000334895 NOP56O00567 594 aaKnown RBP24.06■■□□□ 1.44
TPM1-204ENST00000334895 ZBTB39O15060 712 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 SEPT4O43236 478 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 ZNF862O60290 1169 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 INHAP05111 366 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 GRK4P32298 578 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 PSMC5P62195 406 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 SH3RF1Q7Z6J0 888 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 TLK2Q86UE8 772 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 GRAMD1CQ8IYS0 662 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 RAD54LQ92698 747 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 NUP62CLQ9H1M0 184 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 ZSWIM4Q9H7M6 989 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 MYH9P35579 1960 aaKnown RBP24.06■■□□□ 1.44
TPM1-204ENST00000334895 DYNC1LI2O43237 492 aaPredicted RBP24.06■■□□□ 1.44
TPM1-204ENST00000334895 LYPLA2O95372 231 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 IRX5P78411 483 aaPredicted RBP24.06■■□□□ 1.44
TPM1-204ENST00000334895 SLC9C1Q4G0N8 1177 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 CCDC183Q5T5S1 534 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 SH3TC2Q8TF17 1288 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 STAMQ92783 540 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 PAGE5Q96GU1 130 aa24.06■■□□□ 1.44
TPM1-204ENST00000334895 MAFBQ9Y5Q3 323 aaPredicted RBP24.06■■□□□ 1.44
TPM1-204ENST00000334895 BRCA2P51587 3418 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 BACH1O14867 736 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 LGR5O75473 907 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 STBD1O95210 358 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 HOXD8P13378 290 aaPredicted RBP24.05■■□□□ 1.44
TPM1-204ENST00000334895 CNGA1P29973 690 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 MDM2Q00987 491 aaPredicted RBP24.05■■□□□ 1.44
TPM1-204ENST00000334895 C4orf19Q8IY42 314 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 CEP57L1Q8IYX8 460 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 PIGOQ8TEQ8 1089 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 LARP4BQ92615 738 aaKnown RBP24.05■■□□□ 1.44
TPM1-204ENST00000334895 CUEDC2Q9H467 287 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 ZNF302Q9NR11 478 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 KBTBD4Q9NVX7 518 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 Q9Y3F1 56 aa24.05■■□□□ 1.44
TPM1-204ENST00000334895 DUSP11O75319 330 aaKnown RBP24.04■■□□□ 1.44
TPM1-204ENST00000334895 MMP3P08254 477 aa24.04■■□□□ 1.44
TPM1-204ENST00000334895 ATP4AP20648 1035 aa24.04■■□□□ 1.44
TPM1-204ENST00000334895 MCM6Q14566 821 aa24.04■■□□□ 1.44
TPM1-204ENST00000334895 TRIM50Q86XT4 487 aa24.04■■□□□ 1.44
TPM1-204ENST00000334895 AFAP1L1Q8TED9 768 aa24.04■■□□□ 1.44
TPM1-204ENST00000334895 ATP6V0A1Q93050 837 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms