RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 COLQQ9Y215 455 aaPredicted RBP20.8■□□□□ 0.92
HLA-F-217ENST00000334668 KIF3AQ9Y496 699 aa20.8■□□□□ 0.92
HLA-F-217ENST00000334668 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.8■□□□□ 0.92
HLA-F-217ENST00000334668 LAMA2P24043 3122 aaKnown RBP20.8■□□□□ 0.92
HLA-F-217ENST00000334668 DDX39AO00148 427 aaKnown RBP20.79■□□□□ 0.92
HLA-F-217ENST00000334668 SMIM10L2AP0DMW4 78 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 SMIM10L2BP0DMW5 78 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 CYP2C9P11712 490 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 GJB2P29033 226 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 CHMP4BP1P59074 171 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 ADAM17P78536 824 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 PTGISQ16647 500 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 MFSD5Q6N075 450 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 SMAP1Q8IYB5 467 aaPredicted RBP20.79■□□□□ 0.92
HLA-F-217ENST00000334668 AFAP1L1Q8TED9 768 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 SNX21Q969T3 373 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 HIPK3Q9H422 1215 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 ERAP1Q9NZ08 941 aa20.79■□□□□ 0.92
HLA-F-217ENST00000334668 TBX3O15119 743 aa20.78■□□□□ 0.92
HLA-F-217ENST00000334668 CCNT1O60563 726 aaKnown RBP20.78■□□□□ 0.92
HLA-F-217ENST00000334668 U2AF2P26368 475 aaKnown RBP eCLIP20.78■□□□□ 0.92
HLA-F-217ENST00000334668 RBL2Q08999 1139 aa20.78■□□□□ 0.92
HLA-F-217ENST00000334668 FAM20AQ96MK3 541 aa20.78■□□□□ 0.92
HLA-F-217ENST00000334668 TET1Q8NFU7 2136 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 A0A1W2PPC1 479 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 GAS7O60861 476 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 SLC26A2P50443 739 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 STAT5BP51692 787 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 ZNF200P98182 395 aaPredicted RBP20.77■□□□□ 0.92
HLA-F-217ENST00000334668 LRCH2Q5VUJ6 765 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 DHX38Q92620 1227 aaKnown RBP20.77■□□□□ 0.92
HLA-F-217ENST00000334668 HAS1Q92839 578 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 GLG1Q92896 1179 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 GJA10Q969M2 543 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 TEKT3Q9BXF9 490 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 AZI2Q9H6S1 392 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 SMC3Q9UQE7 1217 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 PCDHA10Q9Y5I2 948 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 TANC1Q9C0D5 1861 aa20.77■□□□□ 0.92
HLA-F-217ENST00000334668 UMODL1Q5DID0 1318 aa20.77■□□□□ 0.91
HLA-F-217ENST00000334668 SCN5AQ14524 2016 aa20.77■□□□□ 0.91
HLA-F-217ENST00000334668 C17orf102A2RUQ5 167 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 WNT7AO00755 349 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 CYP2C18P33260 490 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 PTK7Q13308 1070 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 MIS18BP1Q6P0N0 1132 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 SERINC5Q86VE9 423 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 NOSTRINQ8IVI9 506 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 CCDC60Q8IWA6 550 aaPredicted RBP20.76■□□□□ 0.91
HLA-F-217ENST00000334668 RDM1Q8NG50 284 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 PPP1R12CQ9BZL4 782 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 WNT8AQ9H1J5 351 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 UNC45AQ9H3U1 944 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 TRPC6Q9Y210 931 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 MAFBQ9Y5Q3 323 aaPredicted RBP20.76■□□□□ 0.91
HLA-F-217ENST00000334668 NRCAMQ92823 1304 aa20.76■□□□□ 0.91
HLA-F-217ENST00000334668 WDR64B1ANS9 1081 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 KIF28PB7ZC32 967 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 K7ELQ4 463 aaPredicted RBP20.75■□□□□ 0.91
HLA-F-217ENST00000334668 GNAT1P11488 350 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 SFNP31947 248 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 PLCB4Q15147 1175 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 TRIM71Q2Q1W2 868 aaKnown RBP20.75■□□□□ 0.91
HLA-F-217ENST00000334668 FAM160B1Q5W0V3 765 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 CAGE1Q8TC20 777 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 INTS4Q96HW7 963 aaKnown RBP20.75■□□□□ 0.91
HLA-F-217ENST00000334668 UBE2OQ9C0C9 1292 aaKnown RBP20.75■□□□□ 0.91
HLA-F-217ENST00000334668 DISC1Q9NRI5 854 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 SETD4Q9NVD3 440 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 TCEAL9Q9UHQ7 104 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 NOD1Q9Y239 953 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 EVPLQ92817 2033 aa20.75■□□□□ 0.91
HLA-F-217ENST00000334668 PSAPP07602 524 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 ATP4AP20648 1035 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 MARK3P27448 753 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 JAK3P52333 1124 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 FPGSQ05932 587 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 PPP2R5CQ13362 524 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 BFSP2Q13515 415 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 SWSAP1Q6NVH7 229 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 TMEM199Q8N511 208 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 LMBR1Q8WVP7 490 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 ATP6V0A1Q93050 837 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 WNT8BQ93098 351 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 ZNF302Q9NR11 478 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 VAV3Q9UKW4 847 aa20.74■□□□□ 0.91
HLA-F-217ENST00000334668 MBLAC1A4D2B0 266 aaPredicted RBP20.73■□□□□ 0.91
HLA-F-217ENST00000334668 BACH1O14867 736 aa20.73■□□□□ 0.91
HLA-F-217ENST00000334668 TREHO43280 583 aa20.73■□□□□ 0.91
HLA-F-217ENST00000334668 TRAPPC10P48553 1259 aa20.73■□□□□ 0.91
HLA-F-217ENST00000334668 EPHB4P54760 987 aa20.73■□□□□ 0.91
HLA-F-217ENST00000334668 PPFIA1Q13136 1202 aa20.73■□□□□ 0.91
HLA-F-217ENST00000334668 ORC2Q13416 577 aaPredicted RBP20.73■□□□□ 0.91
HLA-F-217ENST00000334668 PPIGQ13427 754 aaKnown RBP eCLIP20.73■□□□□ 0.91
HLA-F-217ENST00000334668 CCDC155Q8N6L0 562 aa20.73■□□□□ 0.91
HLA-F-217ENST00000334668 VWCEQ96DN2 955 aa20.73■□□□□ 0.91
HLA-F-217ENST00000334668 IGSF9BQ9UPX0 1349 aa20.73■□□□□ 0.91
HLA-F-217ENST00000334668 POTEB3A0JP26 581 aa20.72■□□□□ 0.91
HLA-F-217ENST00000334668 RRN3P2A6NIE6 340 aa20.72■□□□□ 0.91
HLA-F-217ENST00000334668 CSF2RAP15509 400 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms