RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 KRIT1O00522 736 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 SRGNP10124 158 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 ATP5DP30049 168 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 HOXA7P31268 230 aaPredicted RBP16.33■□□□□ 0.2
C9orf47-201ENST00000334490 GUCY1A2P33402 732 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 PAK2Q13177 524 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 SNAPC2Q13487 334 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 CEP55Q53EZ4 464 aa16.33■□□□□ 0.2
C9orf47-201ENST00000334490 GEN1Q17RS7 908 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 PPP4R3CPQ6ZMV5 832 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 ADAT2Q7Z6V5 191 aaKnown RBP16.32■□□□□ 0.2
C9orf47-201ENST00000334490 POTEFA5A3E0 1075 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 GFPT2O94808 682 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 POTEIP0CG38 1075 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 HUNKP57058 714 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 BAATQ14032 418 aaPredicted RBP16.32■□□□□ 0.2
C9orf47-201ENST00000334490 CFAP157Q5JU67 520 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 POTEGQ6S5H5 508 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 POTEEQ6S8J3 1075 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 IGDCC4Q8TDY8 1250 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 TRIM7Q9C029 511 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 NDST4Q9H3R1 872 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 THAP9Q9H5L6 903 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 OATP04181 439 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 HPDP32754 393 aaPredicted RBP16.32■□□□□ 0.2
C9orf47-201ENST00000334490 ORC2Q13416 577 aaPredicted RBP16.32■□□□□ 0.2
C9orf47-201ENST00000334490 NME8Q8N427 588 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 ZNF653Q96CK0 615 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 TBC1D31Q96DN5 1066 aa16.32■□□□□ 0.2
C9orf47-201ENST00000334490 GPBP1L1Q9HC44 474 aaPredicted RBP16.32■□□□□ 0.2
C9orf47-201ENST00000334490 LDHAP00338 332 aaKnown RBP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 ALDH3A1P30838 453 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 PHKA2P46019 1235 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 TWF2Q6IBS0 349 aaKnown RBP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 ODF2LQ9ULJ1 636 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 PSMC5P62195 406 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 RBL2Q08999 1139 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 GOLGA8FQ08AF8 430 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 GOLGA8DPQ0D2H9 430 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 SCARA5Q6ZMJ2 495 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 RAB17Q9H0T7 212 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 SLC16A4O15374 487 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 CAPN2P17655 700 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 HDLBPQ00341 1268 aaKnown RBP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 PNMA8AQ86V59 439 aaPredicted RBP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 MAP7D3Q8IWC1 876 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 FAM133AQ8N9E0 248 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 ZNF668Q96K58 619 aaPredicted RBP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 LRRC4Q9HBW1 653 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 KDM6AO15550 1401 aaPredicted RBP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 A6NJR5 290 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 PP2D1A8MPX8 630 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 TCP1P17987 556 aaKnown RBP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 U2AF2P26368 475 aaKnown RBP eCLIP16.31■□□□□ 0.2
C9orf47-201ENST00000334490 EHHADHQ08426 723 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 DSTYKQ6XUX3 929 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 ANKS4BQ8N8V4 417 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 RAD54LQ92698 747 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 LXNQ9BS40 222 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 PRR12Q9ULL5 1215 aa16.31■□□□□ 0.2
C9orf47-201ENST00000334490 ETF1P62495 437 aaKnown RBP16.3■□□□□ 0.2
C9orf47-201ENST00000334490 KAZNQ674X7 775 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 FAM76AQ8TAV0 307 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 HAUS1Q96CS2 278 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 KAZALD1Q96I82 304 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 ZBED2Q9BTP6 218 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 DDX41Q9UJV9 622 aaKnown RBP16.3■□□□□ 0.2
C9orf47-201ENST00000334490 PCDHA10Q9Y5I2 948 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 TXNP10599 105 aaKnown RBP16.3■□□□□ 0.2
C9orf47-201ENST00000334490 TGFB2P61812 414 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 ITKQ08881 620 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 ELF2Q15723 593 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 RHPN2Q8IUC4 686 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 TOPORSQ9NS56 1045 aaPredicted RBP16.3■□□□□ 0.2
C9orf47-201ENST00000334490 NRBP1Q9UHY1 535 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 INPP5FQ9Y2H2 1132 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 RAET1EQ8TD07 263 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 RPGRIP1Q96KN7 1286 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 PRMT6Q96LA8 375 aaPredicted RBP16.3■□□□□ 0.2
C9orf47-201ENST00000334490 MTRQ99707 1265 aa16.3■□□□□ 0.2
C9orf47-201ENST00000334490 TBC1D8O95759 1140 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 VPS37BQ9H9H4 285 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 ITSN1Q15811 1721 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 DENND3A2RUS2 1198 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 PPP4CP60510 307 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 LGSNQ5TDP6 509 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 C9orf131Q5VYM1 1079 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 INTS8Q75QN2 995 aaKnown RBP16.29■□□□□ 0.2
C9orf47-201ENST00000334490 ANKRD13AQ8IZ07 590 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 XXYLT1Q8NBI6 393 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 TRIM11Q96F44 468 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 SMC6Q96SB8 1091 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 BFSP1Q12934 665 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 ZNF568Q3ZCX4 644 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 CTAGE3PQ8IX95 158 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 SEPT10Q9P0V9 454 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 SLC9A2Q9UBY0 812 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 ZNF148Q9UQR1 794 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms