RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 SREBF1P36956 1147 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 NASPP49321 788 aaPredicted RBP11.01□□□□□ -0.65
SYN3-201ENST00000332840 NLRP5P59047 1200 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 CEBPZQ03701 1054 aaKnown RBP11.01□□□□□ -0.65
SYN3-201ENST00000332840 MFSD10Q14728 455 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 STK38Q15208 465 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 HSDL1Q3SXM5 330 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 TYW1BQ6NUM6 668 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 NIPA1Q7RTP0 329 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
SYN3-201ENST00000332840 RETREG2Q8NC44 543 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 CAGE1Q8TC20 777 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 KCNG4Q8TDN1 519 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 PPP1R12CQ9BZL4 782 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 JADE2Q9NQC1 790 aa11.01□□□□□ -0.65
SYN3-201ENST00000332840 LCTP09848 1927 aa11□□□□□ -0.65
SYN3-201ENST00000332840 HAS3O00219 553 aa11□□□□□ -0.65
SYN3-201ENST00000332840 GNAT1P11488 350 aa11□□□□□ -0.65
SYN3-201ENST00000332840 ITGB5P18084 799 aa11□□□□□ -0.65
SYN3-201ENST00000332840 CLK2P49760 499 aaKnown RBP11□□□□□ -0.65
SYN3-201ENST00000332840 PSEN2P49810 448 aa11□□□□□ -0.65
SYN3-201ENST00000332840 CHMP4BP1P59074 171 aa11□□□□□ -0.65
SYN3-201ENST00000332840 SETQ01105 290 aaPredicted RBP11□□□□□ -0.65
SYN3-201ENST00000332840 SP2Q02086 613 aa11□□□□□ -0.65
SYN3-201ENST00000332840 SF3A1Q15459 793 aaKnown RBP11□□□□□ -0.65
SYN3-201ENST00000332840 PTGISQ16647 500 aa11□□□□□ -0.65
SYN3-201ENST00000332840 KIAA0753Q2KHM9 967 aa11□□□□□ -0.65
SYN3-201ENST00000332840 CEP55Q53EZ4 464 aa11□□□□□ -0.65
SYN3-201ENST00000332840 RILPL1Q5EBL4 403 aa11□□□□□ -0.65
SYN3-201ENST00000332840 GALNT17Q6IS24 598 aa11□□□□□ -0.65
SYN3-201ENST00000332840 CYFIP1Q7L576 1253 aa11□□□□□ -0.65
SYN3-201ENST00000332840 LINC00301Q8NCQ3 95 aa11□□□□□ -0.65
SYN3-201ENST00000332840 KAT2BQ92831 832 aa11□□□□□ -0.65
SYN3-201ENST00000332840 RNPC3Q96LT9 517 aaKnown RBP11□□□□□ -0.65
SYN3-201ENST00000332840 MXRA8Q9BRK3 442 aa11□□□□□ -0.65
SYN3-201ENST00000332840 SDF4Q9BRK5 362 aa11□□□□□ -0.65
SYN3-201ENST00000332840 SEMA6BQ9H3T3 888 aa11□□□□□ -0.65
SYN3-201ENST00000332840 IL23AQ9NPF7 189 aa11□□□□□ -0.65
SYN3-201ENST00000332840 TRMT13Q9NUP7 481 aaKnown RBP11□□□□□ -0.65
SYN3-201ENST00000332840 TMEM63CQ9P1W3 806 aa11□□□□□ -0.65
SYN3-201ENST00000332840 GTF2IRD1Q9UHL9 959 aa11□□□□□ -0.65
SYN3-201ENST00000332840 H3BRB1 525 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 SPTLC2O15270 562 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 LETM1O95202 739 aaPredicted RBP10.99□□□□□ -0.65
SYN3-201ENST00000332840 LGALS2P05162 132 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 ZNF286BP0CG31 522 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 CSF2RAP15509 400 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 CYP2C18P33260 490 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 ZNF76P36508 570 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 SMAD3P84022 425 aaKnown RBP10.99□□□□□ -0.65
SYN3-201ENST00000332840 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 SEMA3FQ13275 785 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 NR5A1Q13285 461 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 SLC39A14Q15043 492 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 CCDC183Q5T5S1 534 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 FAM109BQ6ICB4 259 aaPredicted RBP10.99□□□□□ -0.65
SYN3-201ENST00000332840 DAGLBQ8NCG7 672 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 AFAP1L1Q8TED9 768 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 SEPT1Q8WYJ6 367 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 PGBD1Q96JS3 809 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 GPR20Q99678 358 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 FTOQ9C0B1 505 aaKnown RBP eCLIP10.99□□□□□ -0.65
SYN3-201ENST00000332840 TTYH1Q9H313 450 aaPredicted RBP10.99□□□□□ -0.65
SYN3-201ENST00000332840 TUT1Q9H6E5 874 aaKnown RBP10.99□□□□□ -0.65
SYN3-201ENST00000332840 JPH1Q9HDC5 661 aaPredicted RBP10.99□□□□□ -0.65
SYN3-201ENST00000332840 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 KCNH7Q9NS40 1196 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 TCEAL9Q9UHQ7 104 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 NOL7Q9UMY1 257 aaKnown RBP10.99□□□□□ -0.65
SYN3-201ENST00000332840 CLIC4Q9Y696 253 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 NFASCO94856 1347 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 MUC3AQ02505 3323 aa10.99□□□□□ -0.65
SYN3-201ENST00000332840 MEIS1O00470 390 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 PPP6R2O75170 966 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 RPLP2P05387 115 aaKnown RBP10.98□□□□□ -0.65
SYN3-201ENST00000332840 CYP3A4P08684 503 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 CYP2C9P11712 490 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 ACTN1P12814 892 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 FOSL2P15408 326 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 KCNA2P16389 499 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 ME1P48163 572 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 ZNF445P59923 1031 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 RBL2Q08999 1139 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 PTK7Q13308 1070 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 NPY5RQ15761 445 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 ZSCAN23Q3MJ62 389 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 ADALQ6DHV7 355 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 BLIDQ8IZY5 108 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 OXER1Q8TDS5 423 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 ZFP91Q96JP5 570 aaPredicted RBP10.98□□□□□ -0.65
SYN3-201ENST00000332840 C16orf70Q9BSU1 422 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 AZI2Q9H6S1 392 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 HDAC6Q9UBN7 1215 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 PCDHA4Q9UN74 947 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 CEP131Q9UPN4 1083 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 CHD9Q3L8U1 2897 aa10.98□□□□□ -0.65
SYN3-201ENST00000332840 TMEM265A0A087WTH1 108 aa10.97□□□□□ -0.65
SYN3-201ENST00000332840 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.97□□□□□ -0.65
SYN3-201ENST00000332840 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms