RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 MTIF2P46199 727 aaKnown RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 GNAQP50148 359 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 PEX5P50542 639 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 VWA3BQ502W6 1294 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 PDXDC1Q6P996 788 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 LRRC34Q8IZ02 419 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 FANCBQ8NB91 859 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 RBBP8NLQ8NC74 664 aaPredicted RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 HINFPQ9BQA5 517 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.14□□□□□ -0.95
SKA2-201ENST00000330137 ROPN1BQ9BZX4 212 aaPredicted RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 ROPN1Q9HAT0 212 aaPredicted RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 KBTBD4Q9NVX7 518 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 CYP39A1Q9NYL5 469 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 CEP126Q9P2H0 1117 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 ATXN10Q9UBB4 475 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 SCOCQ9UIL1 159 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 GDAQ9Y2T3 454 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 UTP11Q9Y3A2 253 aaKnown RBP9.14□□□□□ -0.95
SKA2-201ENST00000330137 PCDHGA4Q9Y5G9 962 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 RREB1Q92766 1687 aa9.14□□□□□ -0.95
SKA2-201ENST00000330137 PALMO75781 387 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 EYA4O95677 639 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 KRT16P08779 473 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 SP100P23497 879 aaPredicted RBP9.13□□□□□ -0.95
SKA2-201ENST00000330137 AIMP1Q12904 312 aaKnown RBP9.13□□□□□ -0.95
SKA2-201ENST00000330137 PTGDRQ13258 359 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 ADAM9Q13443 819 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 RPS6KA1Q15418 735 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 MAN2A1Q16706 1144 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 GSTA3Q16772 222 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 MFSD5Q6N075 450 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 COPS6Q7L5N1 327 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 PLBD2Q8NHP8 589 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 MAIP1Q8WWC4 291 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 BAP1Q92560 729 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 ELAC2Q9BQ52 826 aaKnown RBP9.13□□□□□ -0.95
SKA2-201ENST00000330137 TIPINQ9BVW5 301 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 CCSER1Q9C0I3 900 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 BLZF1Q9H2G9 400 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 PABPC3Q9H361 631 aaKnown RBP9.13□□□□□ -0.95
SKA2-201ENST00000330137 DISC1Q9NRI5 854 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 ATP8A2Q9NTI2 1148 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 LARSQ9P2J5 1176 aaKnown RBP9.13□□□□□ -0.95
SKA2-201ENST00000330137 PRKAG3Q9UGI9 489 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 SALL4Q9UJQ4 1053 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 USP21Q9UK80 565 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 LRCH1Q9Y2L9 728 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 TJP1Q07157 1748 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 LAD1O00515 517 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 NCK2O43639 380 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 UNC5CO95185 931 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 PCK1P35558 622 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 STAT6P42226 847 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 RASSF2P50749 326 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 RBM5P52756 815 aaKnown RBP eCLIP9.13□□□□□ -0.95
SKA2-201ENST00000330137 FKBP4Q02790 459 aaKnown RBP eCLIP9.13□□□□□ -0.95
SKA2-201ENST00000330137 WTAPQ15007 396 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 FAM133BQ5BKY9 247 aaKnown RBP9.13□□□□□ -0.95
SKA2-201ENST00000330137 SH2D4BQ5SQS7 431 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 OR52E8Q6IFG1 317 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 ASAP3Q8TDY4 903 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 ANKS1AQ92625 1134 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 FAM136AQ96C01 138 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 LRMDAQ9H2I8 198 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 ADAM7Q9H2U9 754 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 EHD2Q9NZN4 543 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 ZSWIM5Q9P217 1185 aa9.13□□□□□ -0.95
SKA2-201ENST00000330137 RGS17Q9UGC6 210 aaPredicted RBP9.13□□□□□ -0.95
SKA2-201ENST00000330137 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.13□□□□□ -0.95
SKA2-201ENST00000330137 TRIM49BA6NDI0 452 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 CALM1P0DP23 149 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 CALM2P0DP24 149 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 CALM3P0DP25 149 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 ATP5DP30049 168 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 RASSF7Q02833 373 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 SLC18A3Q16572 532 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 PABPC1LQ4VXU2 614 aaKnown RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 AKNAD1Q5T1N1 836 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 POTEAQ6S8J7 498 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 OXER1Q8TDS5 423 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 PIGOQ8TEQ8 1089 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 OPTNQ96CV9 577 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 FGD4Q96M96 766 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 NAP1L3Q99457 506 aaPredicted RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 RNF41Q9H4P4 317 aaPredicted RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 ABCF3Q9NUQ8 709 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 SMARCAL1Q9NZC9 954 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 CEP72Q9P209 647 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 ECE2O60344 883 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 KIF4AO95239 1232 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 TPBGLP0DKB5 382 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 RXRAP19793 462 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 PMS1P54277 932 aaKnown RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 NPEPPSP55786 919 aa9.12□□□□□ -0.95
SKA2-201ENST00000330137 MRPS25P82663 173 aaKnown RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 DHX9Q08211 1270 aaKnown RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 RRP12Q5JTH9 1297 aaKnown RBP9.12□□□□□ -0.95
SKA2-201ENST00000330137 HGSNATQ68CP4 663 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms