RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 TEX2Q8IWB9 1127 aa2.91□□□□□ -1.94
RGPD6-201ENST00000329516 ATXN2LQ8WWM7 1075 aaKnown RBP2.91□□□□□ -1.94
RGPD6-201ENST00000329516 GANQ9H2C0 597 aa2.91□□□□□ -1.94
RGPD6-201ENST00000329516 MRPL46Q9H2W6 279 aaKnown RBP2.91□□□□□ -1.94
RGPD6-201ENST00000329516 CLIP2Q9UDT6 1046 aa2.91□□□□□ -1.94
RGPD6-201ENST00000329516 USP25Q9UHP3 1055 aa2.91□□□□□ -1.94
RGPD6-201ENST00000329516 VAV3Q9UKW4 847 aa2.91□□□□□ -1.94
RGPD6-201ENST00000329516 PALM3A6NDB9 673 aaPredicted RBP2.9□□□□□ -1.94
RGPD6-201ENST00000329516 GOLGA6L9A6NEM1 432 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 KRT18P05783 430 aaKnown RBP2.9□□□□□ -1.94
RGPD6-201ENST00000329516 VIMP08670 466 aaKnown RBP2.9□□□□□ -1.94
RGPD6-201ENST00000329516 ZSCAN22P10073 491 aaPredicted RBP2.9□□□□□ -1.94
RGPD6-201ENST00000329516 AMPHP49418 695 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 AKNAD1Q5T1N1 836 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 ATL3Q6DD88 541 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 TRAPPC11Q7Z392 1133 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 KBTBD3Q8NAB2 608 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 LPIN2Q92539 896 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 MKL1Q969V6 931 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 NSUN4Q96CB9 384 aaKnown RBP2.9□□□□□ -1.94
RGPD6-201ENST00000329516 FAN1Q9Y2M0 1017 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 C5orf60A6NFR6 353 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 SH3BP5O60239 455 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 COBLO75128 1261 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 IL1RL1Q01638 556 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 ATXN7L2Q5T6C5 722 aaPredicted RBP2.9□□□□□ -1.94
RGPD6-201ENST00000329516 HHATQ5VTY9 493 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 DDX46Q7L014 1031 aaKnown RBP2.9□□□□□ -1.94
RGPD6-201ENST00000329516 LINC01465Q8N7H1 131 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 ALKBH8Q96BT7 664 aaKnown RBP2.9□□□□□ -1.94
RGPD6-201ENST00000329516 MRFAP1L1Q96HT8 127 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 SPATA17Q96L03 361 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 PNMA2Q9UL42 364 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 ADAMTS5Q9UNA0 930 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 SMC3Q9UQE7 1217 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 TIMM22Q9Y584 194 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 PCDHA8Q9Y5H6 950 aa2.9□□□□□ -1.94
RGPD6-201ENST00000329516 STAMBPO95630 424 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 EZRP15311 586 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 IL4RP24394 825 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 SLC12A1Q13621 1099 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 EFTUD2Q15029 972 aaKnown RBP eCLIP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 KARSQ15046 597 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 BRD3Q15059 726 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ACCSLQ4AC99 568 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 TSEN54Q7Z6J9 526 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 RPTORQ8N122 1335 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 CCDC150Q8NCX0 1101 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 USP9XQ93008 2570 aaPredicted RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 L3MBTL3Q96JM7 780 aaPredicted RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 MIPEPQ99797 713 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 DDX23Q9BUQ8 820 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ZNF212Q9UDV6 495 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 LPAP08519 4548 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 CTAGE5O15320 804 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 B4GALT4O60513 344 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 LUC7L3O95232 432 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 GUCY2CP25092 1073 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 VSNL1P62760 191 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 CDC16Q13042 620 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ODF2Q5BJF6 829 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ALKBH5Q6P6C2 394 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 C15orf52Q6ZUT6 534 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 FERMT3Q86UX7 667 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 LCORLQ8N3X6 602 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ABTB2Q8N961 1025 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 CYP2W1Q8TAV3 490 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 TMC2Q8TDI7 906 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 PRPF31Q8WWY3 499 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 CPVLQ9H3G5 476 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 FAM198AQ9UFP1 575 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ALMS1Q8TCU4 4167 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 NINQ8N4C6 2090 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ZNF75DP51815 510 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 MARSP56192 900 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 STK4Q13043 487 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 COPS6Q7L5N1 327 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 KIRREL3Q8IZU9 778 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 NEK11Q8NG66 645 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 STK32BQ9NY57 414 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 THRAP3Q9Y2W1 955 aaKnown RBP2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ADGRG1Q9Y653 693 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 ZNF407Q9C0G0 2248 aa2.9□□□□□ -1.95
RGPD6-201ENST00000329516 A0A087WZG4 1122 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 DYNC1I1O14576 645 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 SMC2O95347 1197 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 CA5AP35218 305 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 KCNC4Q03721 635 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 PYCR3Q53H96 274 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 GIGYF2Q6Y7W6 1299 aaKnown RBP2.89□□□□□ -1.95
RGPD6-201ENST00000329516 CYP4X1Q8N118 509 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 RAPGEF4Q8WZA2 1011 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 RUFY1Q96T51 708 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 ZNF385DQ9H6B1 395 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 DDX20Q9UHI6 824 aaKnown RBP2.89□□□□□ -1.95
RGPD6-201ENST00000329516 CFAP45Q9UL16 551 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 MYO1CO00159 1063 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 KIF5AQ12840 1032 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 DGKZQ13574 1117 aa2.89□□□□□ -1.95
RGPD6-201ENST00000329516 PDIA5Q14554 519 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms