RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 PRPF6O94906 941 aaKnown RBP17.56■□□□□ 0.4
PGBD2-201ENST00000329291 FGFR1OPO95684 399 aaKnown RBP17.56■□□□□ 0.4
PGBD2-201ENST00000329291 TUBB4AP04350 444 aa17.56■□□□□ 0.4
PGBD2-201ENST00000329291 TRIM21P19474 475 aaKnown RBP17.56■□□□□ 0.4
PGBD2-201ENST00000329291 EIF2AK2P19525 551 aaKnown RBP17.56■□□□□ 0.4
PGBD2-201ENST00000329291 SETQ01105 290 aaPredicted RBP17.56■□□□□ 0.4
PGBD2-201ENST00000329291 KCNA1Q09470 495 aa17.56■□□□□ 0.4
PGBD2-201ENST00000329291 TKFCQ3LXA3 575 aa17.56■□□□□ 0.4
PGBD2-201ENST00000329291 NOL9Q5SY16 702 aaKnown RBP17.56■□□□□ 0.4
PGBD2-201ENST00000329291 BANK1Q8NDB2 785 aa17.56■□□□□ 0.4
PGBD2-201ENST00000329291 PCMTD1Q96MG8 357 aaPredicted RBP17.56■□□□□ 0.4
PGBD2-201ENST00000329291 REXO2Q9Y3B8 237 aaKnown RBP17.56■□□□□ 0.4
PGBD2-201ENST00000329291 COL4A3BPQ9Y5P4 624 aa17.56■□□□□ 0.4
PGBD2-201ENST00000329291 UBIAD1Q9Y5Z9 338 aa17.56■□□□□ 0.4
PGBD2-201ENST00000329291 NCBP1Q09161 790 aaKnown RBP17.55■□□□□ 0.4
PGBD2-201ENST00000329291 EPHA7Q15375 998 aa17.55■□□□□ 0.4
PGBD2-201ENST00000329291 FKBP15Q5T1M5 1219 aa17.55■□□□□ 0.4
PGBD2-201ENST00000329291 PCNX4Q63HM2 1172 aa17.55■□□□□ 0.4
PGBD2-201ENST00000329291 SULF1Q8IWU6 871 aa17.55■□□□□ 0.4
PGBD2-201ENST00000329291 REPS2Q8NFH8 660 aa17.55■□□□□ 0.4
PGBD2-201ENST00000329291 TEKT3Q9BXF9 490 aa17.55■□□□□ 0.4
PGBD2-201ENST00000329291 IKZF4Q9H2S9 585 aa17.55■□□□□ 0.4
PGBD2-201ENST00000329291 GOLGA6L9A6NEM1 432 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 DPY19L2Q6NUT2 758 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 C12orf42Q96LP6 360 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 RIT2Q99578 217 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 AGO4Q9HCK5 861 aaKnown RBP17.54■□□□□ 0.4
PGBD2-201ENST00000329291 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.54■□□□□ 0.4
PGBD2-201ENST00000329291 V9GYY5 206 aaPredicted RBP17.54■□□□□ 0.4
PGBD2-201ENST00000329291 BCRP11274 1271 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 ADAM9Q13443 819 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 NSMFQ6X4W1 530 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 ZC3H3Q8IXZ2 948 aaKnown RBP17.54■□□□□ 0.4
PGBD2-201ENST00000329291 SMCR8Q8TEV9 937 aaPredicted RBP17.54■□□□□ 0.4
PGBD2-201ENST00000329291 LXNQ9BS40 222 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 NUP58Q9BVL2 599 aa17.54■□□□□ 0.4
PGBD2-201ENST00000329291 FAM207AQ9NSI2 230 aaPredicted RBP17.54■□□□□ 0.4
PGBD2-201ENST00000329291 EPN1Q9Y6I3 576 aaPredicted RBP17.54■□□□□ 0.4
PGBD2-201ENST00000329291 MYCLP12524 364 aaPredicted RBP17.53■□□□□ 0.4
PGBD2-201ENST00000329291 ZBED6P86452 979 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 KCNMA1Q12791 1236 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 BAATQ14032 418 aaPredicted RBP17.53■□□□□ 0.4
PGBD2-201ENST00000329291 PGM5Q15124 567 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 MEA1Q16626 185 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 KNOP1Q1ED39 458 aaKnown RBP17.53■□□□□ 0.4
PGBD2-201ENST00000329291 RETREG2Q8NC44 543 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.53■□□□□ 0.4
PGBD2-201ENST00000329291 CEP63Q96MT8 703 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 JADE2Q9NQC1 790 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 TMOD4Q9NZQ9 345 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 FRMPD4Q14CM0 1322 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
PGBD2-201ENST00000329291 ATP9AO75110 1047 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 USP2O75604 605 aaPredicted RBP17.53■□□□□ 0.4
PGBD2-201ENST00000329291 NMT1P30419 496 aaKnown RBP17.53■□□□□ 0.4
PGBD2-201ENST00000329291 ARHGAP25P42331 645 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 CCDC40Q4G0X9 1142 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 RNF207Q6ZRF8 634 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 SAMD3Q8N6K7 520 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 NACC1Q96RE7 527 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 RMDN3Q96TC7 470 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 MMRN2Q9H8L6 949 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 ADAMTS5Q9UNA0 930 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 TFR2Q9UP52 801 aa17.53■□□□□ 0.4
PGBD2-201ENST00000329291 URI1O94763 535 aaPredicted RBP17.52■□□□□ 0.4
PGBD2-201ENST00000329291 NDUFA10O95299 355 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 DSG3P32926 999 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 FIGNQ5HY92 759 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 NIPA1Q7RTP0 329 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 TRIM59Q8IWR1 403 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 KCTD17Q8N5Z5 321 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 PDCD2LQ9BRP1 358 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 PXMP2Q9NR77 195 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 RNF146Q9NTX7 359 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 MAP3K20Q9NYL2 800 aaKnown RBP17.52■□□□□ 0.4
PGBD2-201ENST00000329291 AFG3L2Q9Y4W6 797 aa17.52■□□□□ 0.4
PGBD2-201ENST00000329291 A0A1W2PQJ5 194 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 PPP1R12BO60237 982 aaPredicted RBP17.51■□□□□ 0.39
PGBD2-201ENST00000329291 TBCAO75347 108 aaKnown RBP17.51■□□□□ 0.39
PGBD2-201ENST00000329291 SLU7O95391 586 aaKnown RBP17.51■□□□□ 0.39
PGBD2-201ENST00000329291 CASQ1P31415 396 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 APBA1Q02410 837 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 MTMR1Q13613 665 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 TMEM132BQ14DG7 1078 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 ZC2HC1CQ53FD0 456 aaPredicted RBP17.51■□□□□ 0.39
PGBD2-201ENST00000329291 MIER3Q7Z3K6 550 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 GPIHBP1Q8IV16 184 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 KSR1Q8IVT5 923 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 ANKRD7Q92527 254 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 FIZ1Q96SL8 496 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
PGBD2-201ENST00000329291 TRAF3IP3Q9Y228 551 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 RLFQ13129 1914 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 GCNT3O95395 438 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 NR2F2P24468 414 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 MARSP56192 900 aaKnown RBP17.51■□□□□ 0.39
PGBD2-201ENST00000329291 MAP3K9P80192 1104 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 EDRF1Q3B7T1 1238 aa17.51■□□□□ 0.39
PGBD2-201ENST00000329291 SNRNP48Q6IEG0 339 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms