RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 SPZ1Q9BXG8 430 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 TRIM6Q9C030 488 aaPredicted RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 GANQ9H2C0 597 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 IL17RBQ9NRM6 502 aa12.32□□□□□ -0.44
GINS3-202ENST00000328514 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.32□□□□□ -0.44
GINS3-202ENST00000328514 SUCLA2Q9P2R7 463 aaPredicted RBP12.32□□□□□ -0.44
GINS3-202ENST00000328514 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 PHF20L1A8MW92 1017 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 DCDC2CA8MYV0 355 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 CCNT1O60563 726 aaKnown RBP12.31□□□□□ -0.44
GINS3-202ENST00000328514 ALADP13716 330 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 TECP42680 631 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 MMP13P45452 471 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 NPEPPSP55786 919 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 KLHL30Q0D2K2 578 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 ZNF268Q14587 947 aaPredicted RBP12.31□□□□□ -0.44
GINS3-202ENST00000328514 HEATR3Q7Z4Q2 680 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 HOOK3Q86VS8 718 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 MYOCDQ8IZQ8 938 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 UBLCP1Q8WVY7 318 aaPredicted RBP12.31□□□□□ -0.44
GINS3-202ENST00000328514 RAD54LQ92698 747 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 RSRC1Q96IZ7 334 aaKnown RBP12.31□□□□□ -0.44
GINS3-202ENST00000328514 LSM14BQ9BX40 385 aaKnown RBP12.31□□□□□ -0.44
GINS3-202ENST00000328514 PACSIN1Q9BY11 444 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 KCNMB3Q9NPA1 279 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 ADAMTS1Q9UHI8 967 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 STXBP5LQ9Y2K9 1186 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 NOC2LQ9Y3T9 749 aaKnown RBP12.31□□□□□ -0.44
GINS3-202ENST00000328514 ROBO3Q96MS0 1386 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 CEP104O60308 925 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 ZPR1O75312 459 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 MYCNP04198 464 aaPredicted RBP12.31□□□□□ -0.44
GINS3-202ENST00000328514 SMARCA1P28370 1054 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 GNA11P29992 359 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 FLT3P36888 993 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 PRKCIP41743 596 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 IRX1P78414 480 aaPredicted RBP12.31□□□□□ -0.44
GINS3-202ENST00000328514 ASIC2Q16515 512 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 PPP2R5EQ16537 467 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 LETM2Q2VYF4 491 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 KRT71Q3SY84 523 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 TMEM119Q4V9L6 283 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 PARP10Q53GL7 1025 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 IRF2BP2Q7Z5L9 587 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 DDX42Q86XP3 938 aaKnown RBP eCLIP12.31□□□□□ -0.44
GINS3-202ENST00000328514 METTL13Q8N6R0 699 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 LMBR1Q8WVP7 490 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 TANGO6Q9C0B7 1094 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 INTUQ9ULD6 942 aa12.31□□□□□ -0.44
GINS3-202ENST00000328514 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 KRIT1O00522 736 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 OPLAHO14841 1288 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 DAPK3O43293 454 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 CALRP27797 417 aaKnown RBP12.3□□□□□ -0.44
GINS3-202ENST00000328514 DNA2P51530 1060 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 RNASE9P60153 205 aaKnown RBP12.3□□□□□ -0.44
GINS3-202ENST00000328514 EVX2Q03828 476 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 DHX9Q08211 1270 aaKnown RBP12.3□□□□□ -0.44
GINS3-202ENST00000328514 C11orf91Q3C1V1 193 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 DPY19L2P1Q6NXN4 242 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 TPCN2Q8NHX9 752 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 ATXN2LQ8WWM7 1075 aaKnown RBP12.3□□□□□ -0.44
GINS3-202ENST00000328514 MOV10L1Q9BXT6 1211 aaKnown RBP12.3□□□□□ -0.44
GINS3-202ENST00000328514 C6orf50Q9HD87 102 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 PRDM11Q9NQV5 511 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 USP21Q9UK80 565 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 ITGB4P16144 1822 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 BCL9O00512 1426 aa12.3□□□□□ -0.44
GINS3-202ENST00000328514 SSBP05455 408 aaKnown RBP eCLIP12.29□□□□□ -0.44
GINS3-202ENST00000328514 PAX7P23759 505 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 GBP2P32456 591 aaPredicted RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 GYG1P46976 350 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 DRG2P55039 364 aaKnown RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 TFAP4Q01664 338 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 GRIK3Q13003 919 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 RAPGEF1Q13905 1077 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 E2F5Q15329 346 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 ZKSCAN8Q15776 578 aaPredicted RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 HIBCHQ6NVY1 386 aaPredicted RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 SYCE1Q8N0S2 351 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 DDX12PQ92771 950 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 DNAJC19Q96DA6 116 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 TMEM109Q9BVC6 243 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 RAB34Q9BZG1 259 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 DDX47Q9H0S4 455 aaKnown RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 BCCIPQ9P287 314 aaKnown RBP eCLIP12.29□□□□□ -0.44
GINS3-202ENST00000328514 NAGPAQ9UK23 515 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 TRPC5Q9UL62 973 aaPredicted RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 C15orf41Q9Y2V0 281 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 UTP11Q9Y3A2 253 aaKnown RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.29□□□□□ -0.44
GINS3-202ENST00000328514 KIF13BQ9NQT8 1826 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 MAST2Q6P0Q8 1798 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 MYH4Q9Y623 1939 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 CTNND1O60716 968 aaKnown RBP12.29□□□□□ -0.44
GINS3-202ENST00000328514 PTK2Q05397 1052 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 PPP1R7Q15435 360 aa12.29□□□□□ -0.44
GINS3-202ENST00000328514 CAVIN4Q5BKX8 364 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms