RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 TRERF1Q96PN7 1200 aa21.33■■□□□ 1
CHMP6-201ENST00000325167 TTYH3Q9C0H2 523 aa21.33■■□□□ 1
CHMP6-201ENST00000325167 KCTD10Q9H3F6 313 aa21.33■■□□□ 1
CHMP6-201ENST00000325167 TAF1DQ9H5J8 278 aaPredicted RBP21.33■■□□□ 1
CHMP6-201ENST00000325167 RGL1Q9NZL6 768 aa21.33■■□□□ 1
CHMP6-201ENST00000325167 ODF2LQ9ULJ1 636 aa21.33■■□□□ 1
CHMP6-201ENST00000325167 TRAF3IP3Q9Y228 551 aa21.33■■□□□ 1
CHMP6-201ENST00000325167 EIF3DO15371 548 aaKnown RBP eCLIP21.32■■□□□ 1
CHMP6-201ENST00000325167 UBXN2AP68543 259 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 MEA1Q16626 185 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 RINT1Q6NUQ1 792 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 RNF207Q6ZRF8 634 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 EPM2AIP1Q7L775 607 aaPredicted RBP21.32■■□□□ 1
CHMP6-201ENST00000325167 UNC45AQ9H3U1 944 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 TCEAL9Q9UHQ7 104 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 DNAI1Q9UI46 699 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 ZHX2Q9Y6X8 837 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 SMCHD1A6NHR9 2005 aa21.32■■□□□ 1
CHMP6-201ENST00000325167 NPHP3-ACAD11A0A0J9YXS1 232 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 PDXKO00764 312 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 ATP2A1O14983 1001 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 CHMP2AO43633 222 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 FAM13AO94988 1023 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 ITGB5P18084 799 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 RPL13P26373 211 aaKnown RBP21.31■■□□□ 1
CHMP6-201ENST00000325167 DSG3P32926 999 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 CTTNQ14247 550 aaKnown RBP21.31■■□□□ 1
CHMP6-201ENST00000325167 COG2Q14746 738 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 KNOP1Q1ED39 458 aaKnown RBP21.31■■□□□ 1
CHMP6-201ENST00000325167 EAPPQ56P03 285 aaPredicted RBP21.31■■□□□ 1
CHMP6-201ENST00000325167 KCNH7Q9NS40 1196 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 COL20A1Q9P218 1284 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 ADAMTS5Q9UNA0 930 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 LOXHD1Q8IVV2 1947 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 SLU7O95391 586 aaKnown RBP21.31■■□□□ 1
CHMP6-201ENST00000325167 RPS6P62753 249 aaKnown RBP21.31■■□□□ 1
CHMP6-201ENST00000325167 CHADLQ6NUI6 762 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 MIER3Q7Z3K6 550 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 SFR1Q86XK3 245 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 CCDC170Q8IYT3 715 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 ZKSCAN4Q969J2 545 aaPredicted RBP21.31■■□□□ 1
CHMP6-201ENST00000325167 ERO1AQ96HE7 468 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 AGO4Q9HCK5 861 aaKnown RBP21.31■■□□□ 1
CHMP6-201ENST00000325167 TBC1D7Q9P0N9 293 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 MYO1AQ9UBC5 1043 aa21.31■■□□□ 1
CHMP6-201ENST00000325167 MAFGO15525 162 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 KIF5CO60282 957 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 P4HBP07237 508 aaKnown RBP21.3■■□□□ 1
CHMP6-201ENST00000325167 CASQ1P31415 396 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 CYLC1P35663 651 aaPredicted RBP21.3■■□□□ 1
CHMP6-201ENST00000325167 ERVK-24P63145 666 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 MTMR1Q13613 665 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 MUM1L1Q5H9M0 696 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 C1orf186Q6ZWK4 172 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 GLIS3Q8NEA6 775 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 ATG4CQ96DT6 458 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 RUSC1Q9BVN2 902 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 NUCKS1Q9H1E3 243 aaKnown RBP21.3■■□□□ 1
CHMP6-201ENST00000325167 ZSWIM4Q9H7M6 989 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 MRPL44Q9H9J2 332 aaKnown RBP21.3■■□□□ 1
CHMP6-201ENST00000325167 PARVGQ9HBI0 331 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 ADARB2Q9NS39 739 aaKnown RBP21.3■■□□□ 1
CHMP6-201ENST00000325167 RNF146Q9NTX7 359 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 TYW1Q9NV66 732 aaKnown RBP21.3■■□□□ 1
CHMP6-201ENST00000325167 HOXC10Q9NYD6 342 aa21.3■■□□□ 1
CHMP6-201ENST00000325167 IPO7O95373 1038 aaKnown RBP21.29■■□□□ 1
CHMP6-201ENST00000325167 GUCY2CP25092 1073 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 EPHX2P34913 555 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 GNG11P61952 73 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 KRT83P78385 493 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 CACNB1Q02641 598 aaPredicted RBP21.29■■□□□ 1
CHMP6-201ENST00000325167 MTF1Q14872 753 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 PGM5Q15124 567 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 RDM1Q8NG50 284 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 DESI2Q9BSY9 194 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 SIK3Q9Y2K2 1263 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 EPN1Q9Y6I3 576 aaPredicted RBP21.29■■□□□ 1
CHMP6-201ENST00000325167 PCNTO95613 3336 aa21.29■■□□□ 1
CHMP6-201ENST00000325167 ARHGEF35A5YM69 484 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 LYPLA2O95372 231 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 HNRNPH3P31942 346 aaKnown RBP21.28■■□□□ 1
CHMP6-201ENST00000325167 SFNP31947 248 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 RAD51AP2Q09MP3 1159 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 ADAM9Q13443 819 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 TUBB2AQ13885 445 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 NFIL3Q16649 462 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 ARHGAP29Q52LW3 1261 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 SH3D19Q5HYK7 790 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 ARHGEF16Q5VV41 709 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 FRMD5Q7Z6J6 570 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 NELFCDQ8IXH7 590 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 REPS2Q8NFH8 660 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 EEF2KMTQ96G04 330 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 RMDN3Q96TC7 470 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 LXNQ9BS40 222 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 TUBB2BQ9BVA1 445 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 TIPINQ9BVW5 301 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 METTL14Q9HCE5 456 aaKnown RBP21.28■■□□□ 1
CHMP6-201ENST00000325167 PXMP2Q9NR77 195 aa21.28■■□□□ 1
CHMP6-201ENST00000325167 HOMER2Q9NSB8 354 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms