RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 SRRDQ9UH36 339 aa17.11■□□□□ 0.33
PRPF3-201ENST00000324862 GSTTP1A0A1W2PQM5 241 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 RAD51AP2Q09MP3 1159 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 NEDD9Q14511 834 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 POSTNQ15063 836 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 METTL7BQ6UX53 244 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 SH3RF1Q7Z6J0 888 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 DHX37Q8IY37 1157 aaKnown RBP17.1■□□□□ 0.33
PRPF3-201ENST00000324862 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
PRPF3-201ENST00000324862 RAD54LQ92698 747 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 SPATA33Q96N06 139 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 POLR3CQ9BUI4 534 aaPredicted RBP17.1■□□□□ 0.33
PRPF3-201ENST00000324862 SAGE1Q9NXZ1 904 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 PCDHA10Q9Y5I2 948 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 ZNF862O60290 1169 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 ARHGAP1Q07960 439 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 PCYT2Q99447 389 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 PCDHA5Q9Y5H7 936 aa17.1■□□□□ 0.33
PRPF3-201ENST00000324862 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
PRPF3-201ENST00000324862 XRCC5P13010 732 aaKnown RBP17.09■□□□□ 0.33
PRPF3-201ENST00000324862 CACNB1Q02641 598 aaPredicted RBP17.09■□□□□ 0.33
PRPF3-201ENST00000324862 UTP14CQ5TAP6 766 aaKnown RBP17.09■□□□□ 0.33
PRPF3-201ENST00000324862 BHMT2Q9H2M3 363 aa17.09■□□□□ 0.33
PRPF3-201ENST00000324862 KBTBD4Q9NVX7 518 aa17.09■□□□□ 0.33
PRPF3-201ENST00000324862 RBM47A0AV96 593 aaKnown RBP17.09■□□□□ 0.33
PRPF3-201ENST00000324862 BACH1O14867 736 aa17.09■□□□□ 0.33
PRPF3-201ENST00000324862 P4HBP07237 508 aaKnown RBP17.09■□□□□ 0.33
PRPF3-201ENST00000324862 TCF7P36402 384 aaPredicted RBP17.09■□□□□ 0.33
PRPF3-201ENST00000324862 RBM43Q6ZSC3 357 aaKnown RBP17.09■□□□□ 0.33
PRPF3-201ENST00000324862 GPR20Q99678 358 aa17.09■□□□□ 0.33
PRPF3-201ENST00000324862 KDM3AQ9Y4C1 1321 aa17.09■□□□□ 0.33
PRPF3-201ENST00000324862 JAK3P52333 1124 aa17.08■□□□□ 0.33
PRPF3-201ENST00000324862 DYMQ7RTS9 669 aa17.08■□□□□ 0.33
PRPF3-201ENST00000324862 GAS2L3Q86XJ1 694 aa17.08■□□□□ 0.33
PRPF3-201ENST00000324862 MSL3Q8N5Y2 521 aaKnown RBP17.08■□□□□ 0.33
PRPF3-201ENST00000324862 NT5C3AQ9H0P0 336 aa17.08■□□□□ 0.33
PRPF3-201ENST00000324862 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.33
PRPF3-201ENST00000324862 BMP2KQ9NSY1 1161 aaPredicted RBP17.08■□□□□ 0.33
PRPF3-201ENST00000324862 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.33
PRPF3-201ENST00000324862 MYMKA6NI61 221 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 SUPT20HL2P0C7V6 817 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 PLA2G4BP0C869 781 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 ATP4AP20648 1035 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 SFNP31947 248 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 QARSP47897 775 aaKnown RBP17.08■□□□□ 0.32
PRPF3-201ENST00000324862 TNFAIP2Q03169 654 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 PLA2G4FQ68DD2 849 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 KCNV1Q6PIU1 500 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 SMAP1Q8IYB5 467 aaPredicted RBP17.08■□□□□ 0.32
PRPF3-201ENST00000324862 AFG1LQ8WV93 481 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 TRIM17Q9Y577 477 aa17.08■□□□□ 0.32
PRPF3-201ENST00000324862 MKI67P46013 3256 aaKnown RBP17.08■□□□□ 0.32
PRPF3-201ENST00000324862 NOP56O00567 594 aaKnown RBP17.07■□□□□ 0.32
PRPF3-201ENST00000324862 ATG7O95352 703 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 CACNB2Q08289 660 aaPredicted RBP17.07■□□□□ 0.32
PRPF3-201ENST00000324862 DUSP28Q4G0W2 176 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 DNM3Q9UQ16 869 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 DYNC1LI2O43237 492 aaPredicted RBP17.07■□□□□ 0.32
PRPF3-201ENST00000324862 ADCY3O60266 1144 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 PSAPP07602 524 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 MARK3P27448 753 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 SLC12A3P55017 1021 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 NPEPPSP55786 919 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 DPYDQ12882 1025 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 RAET1EQ8TD07 263 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 PPP1R13LQ8WUF5 828 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 ERO1AQ96HE7 468 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 ZSWIM4Q9H7M6 989 aa17.07■□□□□ 0.32
PRPF3-201ENST00000324862 CNGA1P29973 690 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 CCND3P30281 292 aaPredicted RBP17.06■□□□□ 0.32
PRPF3-201ENST00000324862 ARSHQ5FYA8 562 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 MIS18BP1Q6P0N0 1132 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 ANO5Q75V66 913 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 SV2BQ7L1I2 683 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 GIMAP8Q8ND71 665 aaPredicted RBP17.06■□□□□ 0.32
PRPF3-201ENST00000324862 HPS3Q969F9 1004 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 FUCA2Q9BTY2 467 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 RUSC1Q9BVN2 902 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 STK17AQ9UEE5 414 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 GNEQ9Y223 722 aaKnown RBP17.06■□□□□ 0.32
PRPF3-201ENST00000324862 GH1P01241 217 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 CYBAP13498 195 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 BMP6P22004 513 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 YWHABP31946 246 aaKnown RBP17.06■□□□□ 0.32
PRPF3-201ENST00000324862 PSMC5P62195 406 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 IQSEC1Q6DN90 963 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 SEPT1Q8WYJ6 367 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 ZNF302Q9NR11 478 aa17.06■□□□□ 0.32
PRPF3-201ENST00000324862 STBD1O95210 358 aa17.05■□□□□ 0.32
PRPF3-201ENST00000324862 ZNF286BP0CG31 522 aa17.05■□□□□ 0.32
PRPF3-201ENST00000324862 PRKAR2AP13861 404 aaKnown RBP17.05■□□□□ 0.32
PRPF3-201ENST00000324862 GPBP1Q86WP2 473 aa17.05■□□□□ 0.32
PRPF3-201ENST00000324862 OR6J1Q8NGC5 347 aa17.05■□□□□ 0.32
PRPF3-201ENST00000324862 DDX12PQ92771 950 aa17.05■□□□□ 0.32
PRPF3-201ENST00000324862 PYM1Q9BRP8 204 aaKnown RBP17.05■□□□□ 0.32
PRPF3-201ENST00000324862 USP25Q9UHP3 1055 aa17.05■□□□□ 0.32
PRPF3-201ENST00000324862 PTCH2Q9Y6C5 1203 aa17.05■□□□□ 0.32
PRPF3-201ENST00000324862 IGKV6D-21A0A0A0MT36 114 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms