RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 AIPL1Q9NZN9 384 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 PRKAG3Q9UGI9 489 aa8.53□□□□□ -1.04
CD46-201ENST00000322875 TTC7AQ9ULT0 858 aaPredicted RBP8.53□□□□□ -1.04
CD46-201ENST00000322875 PHLPP1O60346 1717 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 A0A087X0T9 212 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 DPPA5A6NC42 116 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 SOCS7O14512 581 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 MAP3K13O43283 966 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 GJB6O95452 261 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 SHBGP04278 402 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 FAM228BP0C875 321 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 SCG2P13521 617 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 ATP2A2P16615 1042 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 COPS2P61201 443 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 MAP3K12Q12852 859 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 LBRQ14739 615 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 SLC9C1Q4G0N8 1177 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 METTL24Q5JXM2 366 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 TBC1D16Q8TBP0 767 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 IFT43Q96FT9 208 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 NAF1Q96HR8 494 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 RAB17Q9H0T7 212 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 MMRN2Q9H8L6 949 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 ECT2Q9H8V3 914 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 NEFHP12036 1026 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 MSH2P43246 934 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 SSR1P43307 286 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 DHX9Q08211 1270 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 DTHD1Q6ZMT9 781 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 SPATA5Q8NB90 893 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 ELAC2Q9BQ52 826 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 ZBTB3Q9H5J0 574 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 PAPOLBQ9NRJ5 636 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 FAM114A2Q9NRY5 505 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 CPSF2Q9P2I0 782 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 NOC2LQ9Y3T9 749 aaKnown RBP8.52□□□□□ -1.05
CD46-201ENST00000322875 TNS2Q63HR2 1409 aa8.52□□□□□ -1.05
CD46-201ENST00000322875 E7ENQ6 273 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 SMIM22K7EJ46 135 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 PGRMC1O00264 195 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 LAD1O00515 517 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 KCNK3O14649 394 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 VIMP08670 466 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 SKIV2L2P42285 1042 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 RNASE9P60153 205 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 RPS6KA1Q15418 735 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 DPY19L2P1Q6NXN4 242 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 METTL13Q8N6R0 699 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 GBP7Q8N8V2 638 aaPredicted RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 ANKLE1Q8NAG6 615 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 ZBTB38Q8NAP3 1195 aaPredicted RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 ESR2Q92731 530 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 OSBPL1AQ9BXW6 950 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 NACAP1Q9BZK3 213 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 DDX47Q9H0S4 455 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 SLAIN2Q9P270 581 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.51□□□□□ -1.05
CD46-201ENST00000322875 COL1A1P02452 1464 aaPredicted RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 SPDYE3A6NKU9 549 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 ITGA4P13612 1032 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 PLCG1P19174 1290 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 CTCFP49711 727 aaPredicted RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 TUBP50607 506 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 KLRC3Q07444 240 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 PDIA5Q14554 519 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 FAM83BQ5T0W9 1011 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 SFMBT2Q5VUG0 894 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 DUPD1Q68J44 220 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 CATIPQ7Z7H3 387 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 HOOK3Q86VS8 718 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 COL23A1Q86Y22 540 aaPredicted RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 UTP4Q969X6 686 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 RNF25Q96BH1 459 aaPredicted RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 PRMT1Q99873 361 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 PABPC3Q9H361 631 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 SH3GLB2Q9NR46 395 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 SAMD15Q9P1V8 674 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 AMACRQ9UHK6 382 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 CICQ96RK0 1608 aaPredicted RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 A0A1B0GUL6 1792 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 LAMB1P07942 1786 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 O00370 1275 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 TTI1O43156 1089 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 LRRC63Q05C16 580 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 DIXDC1Q155Q3 683 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 CNGA2Q16280 664 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 CNNM4Q6P4Q7 775 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 DZIP3Q86Y13 1208 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 BLIDQ8IZY5 108 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 PROCA1Q8NCQ7 364 aaPredicted RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 RAPGEF4Q8WZA2 1011 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 AK8Q96MA6 479 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 AP1M1Q9BXS5 423 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 LUC7LQ9NQ29 371 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 CTNNAL1Q9UBT7 734 aa8.51□□□□□ -1.05
CD46-201ENST00000322875 CNOT7Q9UIV1 285 aaKnown RBP8.51□□□□□ -1.05
CD46-201ENST00000322875 CACNA1SQ13698 1873 aa8.5□□□□□ -1.05
CD46-201ENST00000322875 AGTP01019 485 aa8.5□□□□□ -1.05
CD46-201ENST00000322875 ATF3P18847 181 aa8.5□□□□□ -1.05
CD46-201ENST00000322875 RXRBP28702 533 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms