RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 FAM118BQ9BPY3 351 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 TMBIM4Q9HC24 238 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 BMP2KQ9NSY1 1161 aaPredicted RBP10.54□□□□□ -0.72
RPGR-201ENST00000318842 SNX24Q9Y343 169 aa10.54□□□□□ -0.72
RPGR-201ENST00000318842 H0YGN5 161 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 RDXP35241 583 aaKnown RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 PEX19P40855 299 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 TRAPPC10P48553 1259 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 NAA25Q14CX7 972 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 RPS6KA1Q15418 735 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 MEI1Q5TIA1 1274 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 ZNF746Q6NUN9 644 aaPredicted RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 KCTD1Q719H9 257 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 DAAM2Q86T65 1068 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 BANK1Q8NDB2 785 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 U2AF1L4Q8WU68 220 aaKnown RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 CEP89Q96ST8 783 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 SH2D3AQ9BRG2 576 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 DBR1Q9UK59 544 aaKnown RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.53□□□□□ -0.72
RPGR-201ENST00000318842 NFS1Q9Y697 457 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 BCORQ6W2J9 1755 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 DISP2A7MBM2 1401 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 ALS2Q96Q42 1657 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 FAM107AO95990 144 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 SCTRP47872 440 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 ERFP50548 548 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 PLTPP55058 493 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 IFFO1Q0D2I5 559 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 PABPC4Q13310 644 aaKnown RBP eCLIP10.53□□□□□ -0.72
RPGR-201ENST00000318842 CDC37Q16543 378 aaPredicted RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 GRIPAP1Q4V328 841 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 TBC1D9BQ66K14 1250 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 TEX11Q8IYF3 940 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 FUKQ8N0W3 1084 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 SPICE1Q8N0Z3 855 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 C7orf25Q9BPX7 421 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 ELAC2Q9BQ52 826 aaKnown RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 PANK4Q9NVE7 773 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 TIAM2Q8IVF5 1701 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 GMNCA6NCL1 334 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 GOLGA6L10A6NI86 522 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 CTNND1O60716 968 aaKnown RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 LGR5O75473 907 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 NEBLO76041 1014 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 FGGP02679 453 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 RASA1P20936 1047 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 HIBADHP31937 336 aaKnown RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 GSCP56915 257 aaPredicted RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 MYO1EQ12965 1108 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 NAB2Q15742 525 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 ANKRD20A8PQ5CZ79 823 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 B4GALNT4Q76KP1 1039 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 REXO1Q8N1G1 1221 aaKnown RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 EPS8L3Q8TE67 593 aaKnown RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 ANKS1AQ92625 1134 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 TAF4BQ92750 862 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 SPAG5Q96R06 1193 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 TAF1DQ9H5J8 278 aaPredicted RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 ABCF3Q9NUQ8 709 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 CCDC87Q9NVE4 849 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 ANKIB1Q9P2G1 1089 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 AGAP1Q9UPQ3 857 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 STK38LQ9Y2H1 464 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 ATP6V0A2Q9Y487 856 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 PCDHB13Q9Y5F0 798 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 CACNA1SQ13698 1873 aa10.53□□□□□ -0.72
RPGR-201ENST00000318842 ZNF142P52746 1687 aaPredicted RBP10.53□□□□□ -0.72
RPGR-201ENST00000318842 NUP98P52948 1817 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 SPDYE3A6NKU9 549 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 PPP1R11O60927 126 aaPredicted RBP10.52□□□□□ -0.72
RPGR-201ENST00000318842 FSBPO95073 299 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 KRT18P05783 430 aaKnown RBP10.52□□□□□ -0.72
RPGR-201ENST00000318842 CCDC172P0C7W6 258 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 KCNJ2P63252 427 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 KCNH2Q12809 1159 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 COG2Q14746 738 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 DAB2IPQ5VWQ8 1189 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 GLYCTKQ8IVS8 523 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 PARP9Q8IXQ6 854 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 SLC17A8Q8NDX2 589 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 HVCN1Q96D96 273 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 BTBD6Q96KE9 485 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 CTNNAL1Q9UBT7 734 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 PPP1R9AQ9ULJ8 1098 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 COL4A3BPQ9Y5P4 624 aa10.52□□□□□ -0.72
RPGR-201ENST00000318842 TCRBV7S2A1N4TA0A589 114 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 RASSF9O75901 435 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 MYBP10242 640 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 EPB41P11171 864 aaKnown RBP10.52□□□□□ -0.73
RPGR-201ENST00000318842 KCNJ1P48048 391 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 TUBB4BP68371 445 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 ADAM9Q13443 819 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 GRM4Q14833 912 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 ASIC2Q16515 512 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 SOGA3Q5TF21 947 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 C12orf60Q5U649 245 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 FAM114A1Q8IWE2 563 aa10.52□□□□□ -0.73
RPGR-201ENST00000318842 EYA3Q99504 573 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms