RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 DDX12PQ92771 950 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
PTPRA-202ENST00000318266 FGFBP2Q9BYJ0 223 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 DCP1AQ9NPI6 582 aaPredicted RBP10.56□□□□□ -0.72
PTPRA-202ENST00000318266 TMEM260Q9NX78 707 aa10.56□□□□□ -0.72
PTPRA-202ENST00000318266 UPP2O95045 317 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 CHN1P15882 459 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 SATB1Q01826 763 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 PTK2Q05397 1052 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 CUL1Q13616 776 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 ASIC2Q16515 512 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 KCNK18Q7Z418 384 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 TMC3Q7Z5M5 1100 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 TBCKQ8TEA7 893 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 SLC16A10Q8TF71 515 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 LARP4BQ92615 738 aaKnown RBP10.55□□□□□ -0.72
PTPRA-202ENST00000318266 CUL5Q93034 780 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 XPO6Q96QU8 1125 aaKnown RBP10.55□□□□□ -0.72
PTPRA-202ENST00000318266 TSG101Q99816 390 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 BRIP1Q9BX63 1249 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 ATP6V0A4Q9HBG4 840 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 BLOC1S4Q9NUP1 217 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 CEP72Q9P209 647 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 COL18A1P39060 1754 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 CCT8L1PA6NM43 557 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 STXBP3O00186 592 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 PGRMC1O00264 195 aaKnown RBP10.55□□□□□ -0.72
PTPRA-202ENST00000318266 ORC4O43929 436 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 GRB10Q13322 594 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 DAAM2Q86T65 1068 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 PRCCQ92733 491 aaPredicted RBP10.55□□□□□ -0.72
PTPRA-202ENST00000318266 IQCDQ96DY2 449 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 SPDL1Q96EA4 605 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 CUEDC2Q9H467 287 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 IL17RBQ9NRM6 502 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRA-202ENST00000318266 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRA-202ENST00000318266 NR2E1Q9Y466 385 aa10.55□□□□□ -0.72
PTPRA-202ENST00000318266 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.55□□□□□ -0.72
PTPRA-202ENST00000318266 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
PTPRA-202ENST00000318266 SMCO2A6NFE2 343 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 M0R2N6 131 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 MGRN1O60291 552 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 FGFR1OPO95684 399 aaKnown RBP10.54□□□□□ -0.72
PTPRA-202ENST00000318266 PRDX5P30044 214 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 C1QTNF8P60827 252 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 NONOQ15233 471 aaKnown RBP eCLIP10.54□□□□□ -0.72
PTPRA-202ENST00000318266 TLDC1Q6P9B6 456 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 MAEAQ7L5Y9 396 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 PEX26Q7Z412 305 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 TAX1BP1Q86VP1 789 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 KIF2BQ8N4N8 673 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 SPAG5Q96R06 1193 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 COL4A3BPQ9Y5P4 624 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 F8VZ95 297 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 MYBP10242 640 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 CCDC38Q502W7 563 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 UBAP2Q5T6F2 1119 aaKnown RBP10.54□□□□□ -0.72
PTPRA-202ENST00000318266 UNC13DQ70J99 1090 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 LRRC34Q8IZ02 419 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 MGARPQ8TDB4 240 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 MICAL1Q8TDZ2 1067 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 MKNK2Q9HBH9 465 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 PANK4Q9NVE7 773 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 STK38LQ9Y2H1 464 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 DUOX1Q9NRD9 1551 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 RBAK-RBAKDNI3L0D1 243 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 ANP32DO95626 131 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 KLRK1P26718 216 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 KCNJ2P63252 427 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 MECOMQ03112 1051 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 NEK8Q86SG6 692 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 GUF1Q8N442 669 aaKnown RBP10.54□□□□□ -0.72
PTPRA-202ENST00000318266 ANKS4BQ8N8V4 417 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 SNX29Q8TEQ0 813 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 AK8Q96MA6 479 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 ABCF3Q9NUQ8 709 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 BARHL2Q9NY43 387 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 TFCP2L1Q9NZI6 479 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 MAD2L2Q9UI95 211 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 TMEM59LQ9UK28 342 aa10.54□□□□□ -0.72
PTPRA-202ENST00000318266 PPIP5K2O43314 1243 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 USP11P51784 963 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 IFI35P80217 286 aaPredicted RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 MKRN4PQ13434 485 aaPredicted RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 LRRC14Q15048 493 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 CCDC152Q4G0S7 254 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 ZNF571Q7Z3V5 609 aaPredicted RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 FMNL3Q8IVF7 1028 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 MYOCDQ8IZQ8 938 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 AGAP11Q8TF27 550 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 SCFD2Q8WU76 684 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 PNMA5Q96PV4 448 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 PRMT1Q99873 361 aaKnown RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 CRNKL1Q9BZJ0 848 aaKnown RBP10.53□□□□□ -0.72
PTPRA-202ENST00000318266 MLXIPLQ9NP71 852 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 AGAP1Q9UPQ3 857 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 C5orf60A6NFR6 353 aa10.53□□□□□ -0.72
PTPRA-202ENST00000318266 SPDYE3A6NKU9 549 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms