RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 SWAP70Q9UH65 585 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 NFE2L3Q9Y4A8 694 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 F5H6K3 240 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 RXRAP19793 462 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 HERVK_113P62684 666 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 KLRC3Q07444 240 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 SF3A3Q12874 501 aaKnown RBP eCLIP10.33□□□□□ -0.76
CAPN3-201ENST00000318023 SLC30A9Q6PML9 568 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 CCNI2Q6ZMN8 369 aaPredicted RBP10.33□□□□□ -0.76
CAPN3-201ENST00000318023 OTOP1Q7RTM1 612 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 NLRP14Q86W24 1093 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 NSUN7Q8NE18 718 aaKnown RBP10.33□□□□□ -0.76
CAPN3-201ENST00000318023 TSGA10Q9BZW7 698 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 CHCHD3Q9NX63 227 aaKnown RBP10.33□□□□□ -0.76
CAPN3-201ENST00000318023 GABRQQ9UN88 632 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 PDE4DIPQ5VU43 2346 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 MYH15Q9Y2K3 1946 aa10.33□□□□□ -0.76
CAPN3-201ENST00000318023 PRKCZQ05513 592 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 C2orf54Q08AI8 447 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 TUBB2AQ13885 445 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 KIF22Q14807 665 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 IMMTQ16891 758 aaKnown RBP10.32□□□□□ -0.76
CAPN3-201ENST00000318023 HHATQ5VTY9 493 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 CCDC82Q8N4S0 544 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 CAGE1Q8TC20 777 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 TRIM47Q96LD4 638 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 EPAS1Q99814 870 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 TUBB2BQ9BVA1 445 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 KANSL2Q9H9L4 492 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 ZNF232Q9UNY5 417 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 A0A1W2PQ27 194 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 A0A1W2PQ64 194 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 A0A1W2PQD8 194 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 ZNF185O15231 689 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 SPTLC2O15270 562 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 CTDNEP1O95476 244 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 NDUFB10O96000 172 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 OSBPP22059 807 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 LACTBP83111 547 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-201ENST00000318023 SKOR1P84550 965 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 MTA1Q13330 715 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 NNTQ13423 1086 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 NCAPG2Q86XI2 1143 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 HDAC7Q8WUI4 952 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 ABHD8Q96I13 439 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 ZNF570Q96NI8 536 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 MYL10Q9BUA6 226 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 SAMSN1Q9NSI8 373 aaKnown RBP10.32□□□□□ -0.76
CAPN3-201ENST00000318023 CTDP1Q9Y5B0 961 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-201ENST00000318023 PCDHGC5Q9Y5F6 944 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 PTCH2Q9Y6C5 1203 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 SPDYE3A6NKU9 549 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 ANP32DO95626 131 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 ATP6V1G2O95670 118 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 ATP1A1P05023 1023 aaKnown RBP10.32□□□□□ -0.76
CAPN3-201ENST00000318023 GNAT1P11488 350 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 BMP6P22004 513 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 MCM3P25205 808 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 PTGISQ16647 500 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 AKNAD1Q5T1N1 836 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 TTBK2Q6IQ55 1244 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 HIBCHQ6NVY1 386 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-201ENST00000318023 CCDC174Q6PII3 467 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 USP17L2Q6R6M4 530 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 DNAJC14Q6Y2X3 702 aaPredicted RBP10.32□□□□□ -0.76
CAPN3-201ENST00000318023 ANKRD23Q86SG2 305 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 SLF1Q9BQI6 1058 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 BATF3Q9NR55 127 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 IL17RBQ9NRM6 502 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 HOMER3Q9NSC5 361 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 GJB4Q9NTQ9 266 aa10.32□□□□□ -0.76
CAPN3-201ENST00000318023 HOOK1Q9UJC3 728 aaKnown RBP10.32□□□□□ -0.76
CAPN3-201ENST00000318023 HIP1O00291 1037 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 CYP21A2P08686 494 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 LINGO3P0C6S8 592 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 SBK1Q52WX2 424 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 ANKRD20A8PQ5CZ79 823 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 CTU1Q7Z7A3 348 aaKnown RBP10.31□□□□□ -0.76
CAPN3-201ENST00000318023 RAET1EQ8TD07 263 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 MAGEC3Q8TD91 643 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 UBA5Q9GZZ9 404 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 SENP2Q9HC62 589 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 PPFIA2O75334 1257 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 PPP1R37O75864 691 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 SLC1A4P43007 532 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 SYKP43405 635 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 SCTRP47872 440 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 SLC7A5Q01650 507 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 FILIP1LQ4L180 1135 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 ANO1Q5XXA6 986 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 SLFN13Q68D06 897 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 MAEAQ7L5Y9 396 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 SPATA21Q7Z572 469 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 PPFIBP1Q86W92 1011 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 TCP11Q8WWU5 503 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 CYFIP2Q96F07 1278 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 CCDC17Q96LX7 622 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 WDR18Q9BV38 432 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 ZNF287Q9HBT7 754 aa10.31□□□□□ -0.76
CAPN3-201ENST00000318023 MTMR4Q9NYA4 1195 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms