RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 FLOT1O75955 427 aa11.52□□□□□ -0.57
COL3A1-202ENST00000317840 PDHBP11177 359 aa11.52□□□□□ -0.57
COL3A1-202ENST00000317840 STAT3P40763 770 aa11.52□□□□□ -0.57
COL3A1-202ENST00000317840 IFT88Q13099 833 aa11.52□□□□□ -0.57
COL3A1-202ENST00000317840 ZNF662Q6ZS27 426 aa11.52□□□□□ -0.57
COL3A1-202ENST00000317840 CPXCR1Q8N123 301 aa11.52□□□□□ -0.57
COL3A1-202ENST00000317840 ERMNQ8TAM6 284 aa11.52□□□□□ -0.57
COL3A1-202ENST00000317840 U2AF1L4Q8WU68 220 aaKnown RBP11.52□□□□□ -0.57
COL3A1-202ENST00000317840 PLAAQ9Y263 795 aa11.52□□□□□ -0.57
COL3A1-202ENST00000317840 A6NNZ2 444 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 GCNT3O95395 438 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 PRLRP16471 622 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 SEC24CP53992 1094 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 SLC18A3Q16572 532 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 TUBB8Q3ZCM7 444 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 GLE1Q53GS7 698 aaKnown RBP11.51□□□□□ -0.57
COL3A1-202ENST00000317840 ASPRV1Q53RT3 343 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 ALKBH5Q6P6C2 394 aaKnown RBP11.51□□□□□ -0.57
COL3A1-202ENST00000317840 PROM2Q8N271 834 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 CNKSR1Q969H4 720 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 COA1Q9GZY4 146 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 DDX47Q9H0S4 455 aaKnown RBP11.51□□□□□ -0.57
COL3A1-202ENST00000317840 DAGLAQ9Y4D2 1042 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 M0R2N6 131 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 CLIC2O15247 247 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 AKR1B1P15121 316 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 DDX42Q86XP3 938 aaKnown RBP eCLIP11.51□□□□□ -0.57
COL3A1-202ENST00000317840 LRRC45Q96CN5 670 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 DNM3Q9UQ16 869 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 PCDHA1Q9Y5I3 950 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 DUOX1Q9NRD9 1551 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 POTEFA5A3E0 1075 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 USP17L10C9JJH3 530 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 KRT71Q3SY84 523 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 CCDC174Q6PII3 467 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 POTEGQ6S5H5 508 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 POTEEQ6S8J3 1075 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 OR2W6PQ8NHA6 318 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 BAP1Q92560 729 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 ANKS1AQ92625 1134 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 KDM3AQ9Y4C1 1321 aa11.51□□□□□ -0.57
COL3A1-202ENST00000317840 SPDYE3A6NKU9 549 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 RAD51CO43502 376 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 CRKP46108 304 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 PDIA5Q14554 519 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 CCDC121Q6ZUS5 278 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 TAX1BP1Q86VP1 789 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 LMBR1Q8WVP7 490 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 RNPC3Q96LT9 517 aaKnown RBP11.5□□□□□ -0.57
COL3A1-202ENST00000317840 PURBQ96QR8 312 aaKnown RBP11.5□□□□□ -0.57
COL3A1-202ENST00000317840 CSRNP1Q96S65 589 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 CHD4Q14839 1912 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 PNMA6FA0A0J9YX94 578 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 BACH1O14867 736 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 CHMP2AO43633 222 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 H2AFZP0C0S5 128 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 EPB41P11171 864 aaKnown RBP11.5□□□□□ -0.57
COL3A1-202ENST00000317840 KRT13P13646 458 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 FXR2P51116 673 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL3A1-202ENST00000317840 PLS1Q14651 629 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 TRADDQ15628 312 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 LRRC55Q6ZSA7 311 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 H2AFVQ71UI9 128 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 CPLX4Q7Z7G2 160 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 SP8Q8IXZ3 490 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 ADGRF4Q8IZF3 695 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 IPO4Q8TEX9 1081 aaKnown RBP11.5□□□□□ -0.57
COL3A1-202ENST00000317840 CCDC114Q96M63 670 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 HOMER2Q9NSB8 354 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 DISP2A7MBM2 1401 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 ECE2O60344 883 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 TTLL1O95922 423 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 SLC9A1P19634 815 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 KCNMA1Q12791 1236 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 TTMPQ5BVD1 217 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 CEP89Q96ST8 783 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 MTMR4Q9NYA4 1195 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 MYH3P11055 1940 aa11.5□□□□□ -0.57
COL3A1-202ENST00000317840 SFI1A8K8P3 1242 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 RPL13P26373 211 aaKnown RBP11.49□□□□□ -0.57
COL3A1-202ENST00000317840 POLD1P28340 1107 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 HNRNPH3P31942 346 aaKnown RBP11.49□□□□□ -0.57
COL3A1-202ENST00000317840 NAB2Q15742 525 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 RDH13Q8NBN7 331 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 CCDC26Q8TAB7 109 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 WHAMMQ8TF30 809 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 CABS1Q96KC9 395 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 PCDHAC2Q9Y5I4 1007 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 NUP98P52948 1817 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 TMEM110-MUSTN1A8MSY1 372 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 POLRMTO00411 1230 aaKnown RBP11.49□□□□□ -0.57
COL3A1-202ENST00000317840 CFBP00751 764 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 LSP1P33241 339 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 PPP4CP60510 307 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 UBXN2AP68543 259 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 PTK2Q05397 1052 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 NFIAQ12857 509 aa11.49□□□□□ -0.57
COL3A1-202ENST00000317840 CASKIN2Q8WXE0 1202 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms