RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 BACH1O14867 736 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 NR2F2P24468 414 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 ALS2CLQ60I27 953 aa16.34■□□□□ 0.21
TFE3-201ENST00000315869 DHX37Q8IY37 1157 aaKnown RBP16.34■□□□□ 0.21
TFE3-201ENST00000315869 E7EVH7 732 aa16.33■□□□□ 0.21
TFE3-201ENST00000315869 PDHBP11177 359 aa16.33■□□□□ 0.21
TFE3-201ENST00000315869 PABPC4Q13310 644 aaKnown RBP eCLIP16.33■□□□□ 0.214e-6■■□□□ 12
TFE3-201ENST00000315869 ICE2Q659A1 982 aa16.33■□□□□ 0.21
TFE3-201ENST00000315869 GBP6Q6ZN66 633 aa16.33■□□□□ 0.21
TFE3-201ENST00000315869 ANKS1AQ92625 1134 aa16.33■□□□□ 0.21
TFE3-201ENST00000315869 PSTPIP2Q9H939 334 aa16.33■□□□□ 0.21
TFE3-201ENST00000315869 CEP72Q9P209 647 aa16.33■□□□□ 0.21
TFE3-201ENST00000315869 AKR1B1P15121 316 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 MRPL12P52815 198 aaKnown RBP16.33■□□□□ 0.2
TFE3-201ENST00000315869 CYP4A11Q02928 519 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 RNPC3Q96LT9 517 aaKnown RBP16.33■□□□□ 0.2
TFE3-201ENST00000315869 EMILIN3Q9NT22 766 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 TLR2O60603 784 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 PLA2G4BP0C869 781 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 NR1D1P20393 614 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 ALDH1B1P30837 517 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 SNAP25P60880 206 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 SLC15A2Q16348 729 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 EFCC1Q9HA90 598 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 TSKSQ9UJT2 592 aa16.33■□□□□ 0.2
TFE3-201ENST00000315869 RAD51CO43502 376 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 KCNH2Q12809 1159 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 GPATCH11Q8N954 259 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 CASKIN2Q8WXE0 1202 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 PLAAQ9Y263 795 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 PCDHB13Q9Y5F0 798 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 SLC9A1P19634 815 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 HNRNPH3P31942 346 aaKnown RBP16.32■□□□□ 0.2
TFE3-201ENST00000315869 CUL5Q93034 780 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 MTMR9Q96QG7 549 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 DDX47Q9H0S4 455 aaKnown RBP16.32■□□□□ 0.2
TFE3-201ENST00000315869 DPH5Q9H2P9 285 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 GOPCQ9HD26 462 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 ZNF831Q5JPB2 1677 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 POTEFA5A3E0 1075 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 USP17L10C9JJH3 530 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 RAD17O75943 681 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 POTEIP0CG38 1075 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 POTEGQ6S5H5 508 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 POTEEQ6S8J3 1075 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 C16orf86Q6ZW13 317 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 COA1Q9GZY4 146 aa16.32■□□□□ 0.2
TFE3-201ENST00000315869 SSU72P8A0A1W2PR75 194 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 CLIC2O15247 247 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 ZBTB7AO95365 584 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 PRLRP16471 622 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 HGSNATQ68CP4 663 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 RNF10Q8N5U6 811 aaKnown RBP16.31■□□□□ 0.2
TFE3-201ENST00000315869 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 SMIM23A6NLE4 172 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 PLCG2P16885 1265 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 PPP4CP60510 307 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 IFT88Q13099 833 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 SEMA3FQ13275 785 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 CDC42EP5Q6NZY7 148 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 ADGRF4Q8IZF3 695 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 ARMCX3Q9UH62 379 aaPredicted RBP16.31■□□□□ 0.2
TFE3-201ENST00000315869 ECE2O60344 883 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 SLC18A3Q16572 532 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 PRR16Q569H4 304 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 PEX26Q7Z412 305 aa16.31■□□□□ 0.2
TFE3-201ENST00000315869 ZBTB12Q9Y330 459 aaPredicted RBP16.31■□□□□ 0.2
TFE3-201ENST00000315869 SFI1A8K8P3 1242 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 ABCB4P21439 1286 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 CTNNA1P35221 906 aaKnown RBP16.3■□□□□ 0.2
TFE3-201ENST00000315869 FXR2P51116 673 aaKnown RBP eCLIP16.3■□□□□ 0.2
TFE3-201ENST00000315869 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
TFE3-201ENST00000315869 U2AF1L4Q8WU68 220 aaKnown RBP16.3■□□□□ 0.2
TFE3-201ENST00000315869 HDAC9Q9UKV0 1011 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 ATF5Q9Y2D1 282 aaPredicted RBP16.3■□□□□ 0.2
TFE3-201ENST00000315869 KLRG2A4D1S0 409 aaPredicted RBP16.3■□□□□ 0.2
TFE3-201ENST00000315869 ZNF233A6NK53 670 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 KRIT1O00522 736 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 SETQ01105 290 aaPredicted RBP16.3■□□□□ 0.2
TFE3-201ENST00000315869 NAB2Q15742 525 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 USH1GQ495M9 461 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 B4GALNT4Q76KP1 1039 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 TBC1D22AQ8WUA7 517 aa16.3■□□□□ 0.2
TFE3-201ENST00000315869 NUCKS1Q9H1E3 243 aaKnown RBP16.3■□□□□ 0.2
TFE3-201ENST00000315869 CLRN2A0PK11 232 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 PTK2Q05397 1052 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 PSMD2Q13200 908 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 ALKBH5Q6P6C2 394 aaKnown RBP16.29■□□□□ 0.2
TFE3-201ENST00000315869 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
TFE3-201ENST00000315869 MTMR4Q9NYA4 1195 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
TFE3-201ENST00000315869 LSP1P33241 339 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 ZNF76P36508 570 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 CRKP46108 304 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 EXOC3L4Q17RC7 722 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 DAAM2Q86T65 1068 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 ZNF277Q9NRM2 450 aaPredicted RBP16.29■□□□□ 0.2
TFE3-201ENST00000315869 TLDC2A0PJX2 215 aa16.29■□□□□ 0.2
TFE3-201ENST00000315869 GCOM1H8Y6P7 765 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms