RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 SHC4Q6S5L8 630 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 USP49Q70CQ1 688 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 PLPPR4Q7Z2D5 763 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 NEK9Q8TD19 979 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 KAT2BQ92831 832 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 POLR3CQ9BUI4 534 aaPredicted RBP14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 CCSER1Q9C0I3 900 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 RGL1Q9NZL6 768 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 SAMM50Q9Y512 469 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 MAFBQ9Y5Q3 323 aaPredicted RBP14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 STK24Q9Y6E0 443 aa14.21□□□□□ -0.13
CHMP2A-201ENST00000312547 A0A1W2PQ27 194 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 A0A1W2PQ64 194 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 A0A1W2PQD8 194 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 DNM1LO00429 736 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 SLC26A4O43511 780 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 ZNF862O60290 1169 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 ZEB2O60315 1214 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 MED24O75448 989 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 LYPLA2O95372 231 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 P4HBP07237 508 aaKnown RBP14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 CAPN2P17655 700 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 RPA1P27694 616 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 MNX1P50219 401 aaPredicted RBP14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 KCNA10Q16322 511 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 UGCGQ16739 394 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 SPECC1Q5M775 1068 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 HYIQ5T013 277 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 KRT79Q5XKE5 535 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 SWSAP1Q6NVH7 229 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 CATSPER3Q86XQ3 398 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 TRIM50Q86XT4 487 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 PCSK9Q8NBP7 692 aaKnown RBP14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 ERMNQ8TAM6 284 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 SYMPKQ92797 1274 aaKnown RBP14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 DYDC2Q96IM9 177 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 EPSTI1Q96J88 318 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 SMARCAD1Q9H4L7 1026 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 TUFT1Q9NNX1 390 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 ZNF302Q9NR11 478 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 WRAP73Q9P2S5 460 aaPredicted RBP14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 GABBR1Q9UBS5 961 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 PHF24Q9UPV7 400 aa14.2□□□□□ -0.14
CHMP2A-201ENST00000312547 FAM237AA0A1B0GTK4 181 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 MOXD2PA6NHM9 499 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 HAS3O00219 553 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 BACH1O14867 736 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 STBD1O95210 358 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 ASGR1P07306 291 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 MYL3P08590 195 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 ZNF286BP0CG31 522 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 ATP4AP20648 1035 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 MUTP22033 750 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 UBA7P41226 1012 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 QARSP47897 775 aaKnown RBP14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 SLC26A2P50443 739 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 STAT5BP51692 787 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 PSMC5P62195 406 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 ECM1Q16610 540 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 CSPP1Q1MSJ5 1256 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 UTP14CQ5TAP6 766 aaKnown RBP14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 FAM160B1Q5W0V3 765 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 RESP18Q5W5W9 173 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 HAUS3Q68CZ6 603 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 CXCL17Q6UXB2 119 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 CABP7Q86V35 215 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 C4orf19Q8IY42 314 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 BANK1Q8NDB2 785 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 SNX29Q8TEQ0 813 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 ATP6V0A1Q93050 837 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 GBP4Q96PP9 640 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 LXNQ9BS40 222 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 MTG1Q9BT17 334 aaPredicted RBP14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 TMEM106CQ9BVX2 250 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 AZI2Q9H6S1 392 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 ZSWIM4Q9H7M6 989 aa14.19□□□□□ -0.14
CHMP2A-201ENST00000312547 H3BRB1 525 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 TFRCP02786 760 aaKnown RBP14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 CMA1P23946 247 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 CCT6AP40227 531 aaKnown RBP14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 ACLYP53396 1101 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 CYP4A11Q02928 519 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 CTTNQ14247 550 aaKnown RBP14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 TMEM119Q4V9L6 283 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 PDXDC2PQ6P474 469 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 ANKLE1Q8NAG6 615 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 GLG1Q92896 1179 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 PNMA5Q96PV4 448 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 TUT1Q9H6E5 874 aaKnown RBP14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 ERAP1Q9NZ08 941 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 DOCK5Q9H7D0 1870 aa14.18□□□□□ -0.14
CHMP2A-201ENST00000312547 POTEB3A0JP26 581 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 KBTBD13C9JR72 458 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 DKC1O60832 514 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 CABYRO75952 493 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 PSEN2P49810 448 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 PRKCEQ02156 737 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 GRB10Q13322 594 aa14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 KARSQ15046 597 aaKnown RBP14.17□□□□□ -0.14
CHMP2A-201ENST00000312547 PLCB4Q15147 1175 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms