RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 TRAF7Q6Q0C0 670 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 NIPA1Q7RTP0 329 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 TMCO2Q7Z6W1 182 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-201ENST00000311943 LBHD1Q9BQE6 289 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-201ENST00000311943 CXXC1Q9P0U4 656 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-201ENST00000311943 NOD1Q9Y239 953 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 SAMM50Q9Y512 469 aa13.64□□□□□ -0.23
SCFD1-201ENST00000311943 IGKV6D-21A0A0A0MT36 114 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 BACH1O14867 736 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 ZBTB39O15060 712 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 TLR3O15455 904 aaKnown RBP13.63□□□□□ -0.23
SCFD1-201ENST00000311943 LGR5O75473 907 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 SUPT20HL2P0C7V6 817 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 INSRRP14616 1297 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 MCM7P33993 719 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 ADAM17P78536 824 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 TMEM62Q0P6H9 643 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 TRIM71Q2Q1W2 868 aaKnown RBP13.63□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF618Q5T7W0 954 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 MFSD5Q6N075 450 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 ATP6V0A1Q93050 837 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 PPP1R16BQ96T49 567 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 GABBR1Q9UBS5 961 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 COL6A3P12111 3177 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 MROH7Q68CQ1 1323 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 GAS7O60861 476 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 FAM173BQ6P4H8 233 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 B3GNT9Q6UX72 402 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF365Q70YC5 407 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
SCFD1-201ENST00000311943 BANK1Q8NDB2 785 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF668Q96K58 619 aaPredicted RBP13.63□□□□□ -0.23
SCFD1-201ENST00000311943 KCNMB3Q9NPA1 279 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 VAV3Q9UKW4 847 aa13.63□□□□□ -0.23
SCFD1-201ENST00000311943 C17orf102A2RUQ5 167 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 ZBTB42B2RXF5 422 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 IQCF3P0C7M6 154 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 CKBP12277 381 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 HOXC8P31273 242 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 HMGN5P82970 282 aaKnown RBP13.62□□□□□ -0.23
SCFD1-201ENST00000311943 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
SCFD1-201ENST00000311943 FPGSQ05932 587 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 CUL4AQ13619 759 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 MCTP1Q6DN14 999 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 FERMT3Q86UX7 667 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 SESTD1Q86VW0 696 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF579Q8NAF0 562 aaKnown RBP13.62□□□□□ -0.23
SCFD1-201ENST00000311943 RGL1Q9NZL6 768 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 TRPC6Q9Y210 931 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 PCDHB6Q9Y5E3 794 aa13.62□□□□□ -0.23
SCFD1-201ENST00000311943 NBNO60934 754 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 SPIRE1Q08AE8 756 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 PPFIA1Q13136 1202 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 GRIK4Q16099 956 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 PDXDC2PQ6P474 469 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 KATNAL1Q9BW62 490 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 SMARCAD1Q9H4L7 1026 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF302Q9NR11 478 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 DISC1Q9NRI5 854 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 ERAP1Q9NZ08 941 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 SMC3Q9UQE7 1217 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 EMSYQ7Z589 1322 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 THPOP40225 353 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 TXKP42681 527 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCFD1-201ENST00000311943 TMEM240Q5SV17 173 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 MCTP2Q6DN12 878 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 PPP4R3AQ6IN85 833 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 SERINC5Q86VE9 423 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 TDHQ8IZJ6 230 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 DNAJB3Q8WWF6 145 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 FTOQ9C0B1 505 aaKnown RBP eCLIP13.61□□□□□ -0.23
SCFD1-201ENST00000311943 FAM49AQ9H0Q0 323 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-201ENST00000311943 BMP2KQ9NSY1 1161 aaPredicted RBP13.61□□□□□ -0.23
SCFD1-201ENST00000311943 TBC1D22BQ9NU19 505 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 CHD7Q9P2D1 2997 aa13.61□□□□□ -0.23
SCFD1-201ENST00000311943 WDR81Q562E7 1941 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 POTEMA6NI47 508 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 STBD1O95210 358 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 CYP4A11Q02928 519 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 NOSTRINQ8IVI9 506 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 TEKT3Q9BXF9 490 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 AZI2Q9H6S1 392 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 CDHR5Q9HBB8 845 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF215Q9UL58 517 aaPredicted RBP13.6□□□□□ -0.23
SCFD1-201ENST00000311943 PCDHA10Q9Y5I2 948 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 MAFBQ9Y5Q3 323 aaPredicted RBP13.6□□□□□ -0.23
SCFD1-201ENST00000311943 CHD9Q3L8U1 2897 aa13.6□□□□□ -0.23
SCFD1-201ENST00000311943 POTEB3A0JP26 581 aa13.59□□□□□ -0.23
SCFD1-201ENST00000311943 K7ELQ4 463 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-201ENST00000311943 BMP8BP34820 402 aa13.59□□□□□ -0.23
SCFD1-201ENST00000311943 DRP2Q13474 957 aa13.59□□□□□ -0.23
SCFD1-201ENST00000311943 CTTNQ14247 550 aaKnown RBP13.59□□□□□ -0.23
SCFD1-201ENST00000311943 FOXD4L5Q5VV16 416 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-201ENST00000311943 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
SCFD1-201ENST00000311943 PLA2G4FQ68DD2 849 aa13.59□□□□□ -0.23
SCFD1-201ENST00000311943 NCAPH2Q6IBW4 605 aa13.59□□□□□ -0.23
SCFD1-201ENST00000311943 ZNF746Q6NUN9 644 aaPredicted RBP13.59□□□□□ -0.23
SCFD1-201ENST00000311943 POTEBQ6S5H4 581 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms