RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 PLEKHA4Q9H4M7 779 aa9.5□□□□□ -0.89
LCLAT1-201ENST00000309052 KDM3AQ9Y4C1 1321 aa9.5□□□□□ -0.89
LCLAT1-201ENST00000309052 MACROD2A1Z1Q3 448 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 TRIM49P0CI25 452 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 TRIM49CP0CI26 452 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 PNMA6AP0CW24 399 aaPredicted RBP9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 LY6KQ17RY6 165 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 UNC13DQ70J99 1090 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 KIAA1524Q8TCG1 905 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 BTBD7Q9P203 1132 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 ANKFY1Q9P2R3 1169 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 STK17AQ9UEE5 414 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 TRPC6Q9Y210 931 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 CDK5RAP2Q96SN8 1893 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 IQCA1LA6NCM1 817 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 NPM3O75607 178 aaKnown RBP9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 SARSP49591 514 aaKnown RBP9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 ZNF157P51786 506 aaPredicted RBP9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 CCDC112Q8NEF3 446 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 FAM20AQ96MK3 541 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 AGPAT5Q9NUQ2 364 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 ZNF536O15090 1300 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 GLTPD2A6NH11 291 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 RNASE9P60153 205 aaKnown RBP9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 PDIA5Q14554 519 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 GNPTABQ3T906 1256 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 SAAL1Q96ER3 474 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 SEMA6BQ9H3T3 888 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 SPTLC3Q9NUV7 552 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 INTS13Q9NVM9 706 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 TBC1D12O60347 775 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 SLITRK3O94933 977 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 DSG3P32926 999 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 CASP4P49662 377 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 SPAG1Q07617 926 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 PGM5Q15124 567 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 OTOP1Q7RTM1 612 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 ERO1BQ86YB8 467 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 C2orf69Q8N8R5 385 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 MTMR14Q8NCE2 650 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 CTAGE1Q96RT6 745 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 CHP1Q99653 195 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 PORCNQ9H237 461 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 VPS33BQ9H267 617 aa9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 WRAP73Q9P2S5 460 aaPredicted RBP9.49□□□□□ -0.89
LCLAT1-201ENST00000309052 A0A0U1RQJ8 604 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 GGPS1O95749 300 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 POLR2FP61218 127 aaKnown RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 ITGB3BPQ13352 177 aaPredicted RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 LLGL1Q15334 1064 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 KCTD19Q17RG1 926 aaPredicted RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 VSTM4Q8IW00 320 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 ATRIPQ8WXE1 791 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 NAP1L4Q99733 375 aaKnown RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 TXNRD2Q9NNW7 524 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 RWDD2AQ9UIY3 292 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 NID2Q14112 1375 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 KLRC4O43908 158 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 HIP1RO75146 1068 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 RPA1P27694 616 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 TRAPPC12Q8WVT3 735 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 PLIN4Q96Q06 1357 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 NACC1Q96RE7 527 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 LRRC27Q9C0I9 530 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 COL4A3BPQ9Y5P4 624 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 C19orf81C9J6K1 198 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 LRRN2O75325 713 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 CCND2P30279 289 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 CLK2P49760 499 aaKnown RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 NT5C2P49902 561 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 POLGP54098 1239 aaPredicted RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 STXBP2Q15833 593 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 UGCGQ16739 394 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 TMEM63BQ5T3F8 832 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 TOGARAM2Q6ZUX3 1019 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 DPH6Q7L8W6 267 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 LRRC71Q8N4P6 559 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 CCDC150Q8NCX0 1101 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 VTI1AQ96AJ9 217 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 SPATC1LQ9H0A9 340 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 HSD3B7Q9H2F3 369 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 PARVGQ9HBI0 331 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 PXMP2Q9NR77 195 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 DDX60LQ5H9U9 1706 aaKnown RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 ARAP2Q8WZ64 1704 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 MYH4Q9Y623 1939 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 TTC26A0AVF1 554 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 SPATA31C1P0DKV0 1188 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 ACTN1P12814 892 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 QARSP47897 775 aaKnown RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 TMEM62Q0P6H9 643 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 RINT1Q6NUQ1 792 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 BTNL9Q6UXG8 535 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 SH3RF1Q7Z6J0 888 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 GIMAP8Q8ND71 665 aaPredicted RBP9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 ETNPPLQ8TBG4 499 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 CLEC4DQ8WXI8 215 aa9.48□□□□□ -0.89
LCLAT1-201ENST00000309052 MYH8P13535 1937 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms