RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ZNF18P17022 549 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 SIRT2Q8IXJ6 389 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 TRIML1Q8N9V2 468 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 CACYBPQ9HB71 228 aaKnown RBP11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 EMILIN3Q9NT22 766 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 IMPACTQ9P2X3 320 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 SPATA31D1Q6ZQQ2 1576 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 GSG1L2A8MUP6 293 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 ENTPD3O75355 529 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 VPS52Q8N1B4 723 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 FAM81BQ96LP2 452 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 MST1RQ04912 1400 aa11.63□□□□□ -0.55
SYNPO2-201ENST00000307142 ZNF75DP51815 510 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 CBX1P83916 185 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 PPP1R18Q6NYC8 613 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 RNF180Q86T96 592 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 TAB3Q8N5C8 712 aaPredicted RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 ANKRD13CQ8N6S4 541 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 SMC6Q96SB8 1091 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 CCDC68Q9H2F9 335 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 JPH1Q9HDC5 661 aaPredicted RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 SLC9A2Q9UBY0 812 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 IPO5O00410 1097 aaKnown RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 HUS1O60921 280 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 DDNO94850 711 aaPredicted RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 HEXIM1O94992 359 aaKnown RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 PALM2Q8IXS6 379 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 GRAMD1CQ8IYS0 662 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 GPC3P51654 580 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 SLC39A14Q15043 492 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 DNAJC21Q5F1R6 531 aaKnown RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 FBF1Q8TES7 1133 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 KRT12Q99456 494 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 POLR3FQ9H1D9 316 aaPredicted RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 UBN1Q9NPG3 1134 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 C2orf40Q9H1Z8 148 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 MAP3K20Q9NYL2 800 aaKnown RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 NKIRAS1Q9NYS0 192 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 IVLP07476 585 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 TUBB4BP68371 445 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 OR6B2Q6IFH4 312 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 ZNF449Q6P9G9 518 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 CTNND1O60716 968 aaKnown RBP11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 KRT10P13645 584 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 MAP7D3Q8IWC1 876 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 LY9Q9HBG7 655 aa11.62□□□□□ -0.55
SYNPO2-201ENST00000307142 RICTORQ6R327 1708 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 SAT1P21673 171 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 QARSP47897 775 aaKnown RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 KIF23Q02241 960 aaPredicted RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 LGSNQ5TDP6 509 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PADI6Q6TGC4 694 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PHLDB2Q86SQ0 1253 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 ANKS4BQ8N8V4 417 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PHLPP2Q6ZVD8 1323 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 CFAP221Q4G0U5 840 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 TEX2Q8IWB9 1127 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 CCNYQ8ND76 341 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 ATRIPQ8WXE1 791 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 P2RX5Q93086 422 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 MAGED2Q9UNF1 606 aaPredicted RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 FNDC3AQ9Y2H6 1198 aaKnown RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 GH1P01241 217 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 ZNF658Q5TYW1 1059 aaPredicted RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 ADAT2Q7Z6V5 191 aaKnown RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 TUBGCP2Q9BSJ2 902 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PLEKHA4Q9H4M7 779 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PPFIA1Q13136 1202 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 BAATQ14032 418 aaPredicted RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 ATG9AQ7Z3C6 839 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 POTEDQ86YR6 584 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 MB21D1Q8N884 522 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 OR8K1Q8NGG5 319 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 DHTKD1Q96HY7 919 aaPredicted RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 VPS37BQ9H9H4 285 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 IFT122Q9HBG6 1241 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PIN4Q9Y237 131 aaKnown RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 KCNK3O14649 394 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 CPB1P15086 417 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 KRT33BQ14525 404 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 SPATA1Q5VX52 437 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 RWDD4Q6NW29 188 aaKnown RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 FHDC1Q9C0D6 1143 aaPredicted RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 XPO4Q9C0E2 1151 aaKnown RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 TSKSQ9UJT2 592 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PFASO15067 1338 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 POTEMA6NI47 508 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 BRD1O95696 1058 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 SLC25A27O95847 323 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 CPT1AP50416 773 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PSMD2Q13200 908 aa11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 PRPF31Q8WWY3 499 aaKnown RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 FEZ2Q9UHY8 353 aaPredicted RBP11.61□□□□□ -0.55
SYNPO2-201ENST00000307142 SLC16A4O15374 487 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 TMEM62Q0P6H9 643 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 IFT20Q8IY31 132 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 ZNF653Q96CK0 615 aa11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 MRPL4Q9BYD3 311 aaKnown RBP11.6□□□□□ -0.55
SYNPO2-201ENST00000307142 RIC8AQ9NPQ8 531 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms