RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CRIPAKQ8N1N5 446 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 CDCA3Q99618 268 aaPredicted RBP13.74□□□□□ -0.21
SMIM4-201ENST00000307106 AMNQ9BXJ7 453 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 SORCS3Q9UPU3 1222 aa13.74□□□□□ -0.21
SMIM4-201ENST00000307106 MED19A0JLT2 244 aaPredicted RBP13.73□□□□□ -0.21
SMIM4-201ENST00000307106 BRD1O95696 1058 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 SRGAP2BP0DMP2 458 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 UBE3AQ05086 875 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 NEDD9Q14511 834 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 GNPTABQ3T906 1256 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 CYFIP1Q7L576 1253 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 RSPH3Q86UC2 560 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 RTN4RL1Q86UN2 441 aaPredicted RBP13.73□□□□□ -0.21
SMIM4-201ENST00000307106 TBC1D10CQ8IV04 446 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 OTUD7AQ8TE49 926 aaPredicted RBP13.73□□□□□ -0.21
SMIM4-201ENST00000307106 S1PR5Q9H228 398 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 KAT14Q9H8E8 782 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 AGO3Q9H9G7 860 aaKnown RBP13.73□□□□□ -0.21
SMIM4-201ENST00000307106 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 HELLSQ9NRZ9 838 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 NR2E1Q9Y466 385 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 CDY2AQ9Y6F7 541 aa13.73□□□□□ -0.21
SMIM4-201ENST00000307106 ZMYM6O95789 1325 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 PARP1P09874 1014 aaKnown RBP13.72□□□□□ -0.21
SMIM4-201ENST00000307106 STAG3L1P0CL83 205 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 CD52P31358 61 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 TECP42680 631 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 GATMP50440 423 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 ASTLQ6HA08 431 aaPredicted RBP13.72□□□□□ -0.21
SMIM4-201ENST00000307106 ANKRD54Q6NXT1 300 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 TMEM184AQ6ZMB5 413 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 SAMD3Q8N6K7 520 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 DNAJB3Q8WWF6 145 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 ESR2Q92731 530 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 APOL5Q9BWW9 433 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 FTHL17Q9BXU8 183 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 TELO2Q9Y4R8 837 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 PCDHB12Q9Y5F1 795 aa13.72□□□□□ -0.21
SMIM4-201ENST00000307106 ZNF292O60281 2723 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 NEDD4P46934 1319 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 C2orf16Q68DN1 1984 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 TRIM6-TRIM34B2RNG4 842 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 ERVFC1P60507 584 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 SP4Q02446 784 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 KCNC3Q14003 757 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.21
SMIM4-201ENST00000307106 SYCE2Q6PIF2 218 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 FCHSD1Q86WN1 690 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 IQCA1Q86XH1 822 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 MFSD1Q9H3U5 465 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 SMOC2Q9H3U7 446 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 RNF41Q9H4P4 317 aaPredicted RBP13.71□□□□□ -0.21
SMIM4-201ENST00000307106 TUBE1Q9UJT0 475 aa13.71□□□□□ -0.21
SMIM4-201ENST00000307106 EP300Q09472 2414 aaPredicted RBP13.7□□□□□ -0.22
SMIM4-201ENST00000307106 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 PPP1R11O60927 126 aaPredicted RBP13.7□□□□□ -0.22
SMIM4-201ENST00000307106 FGF18O76093 207 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 SCG2P13521 617 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 MX1P20591 662 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 CLCN5P51795 746 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 MRPS6P82932 125 aaKnown RBP13.7□□□□□ -0.22
SMIM4-201ENST00000307106 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
SMIM4-201ENST00000307106 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 SEMA3FQ13275 785 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 MCMDC2Q4G0Z9 681 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 CCDC178Q5BJE1 867 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 PDE12Q6L8Q7 609 aaKnown RBP13.7□□□□□ -0.22
SMIM4-201ENST00000307106 DGLUCYQ7Z3D6 616 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 RMDN1Q96DB5 314 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 FAM227BQ96M60 508 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 AAASQ9NRG9 546 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 LRFN2Q9ULH4 789 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 PCDHA1Q9Y5I3 950 aa13.7□□□□□ -0.22
SMIM4-201ENST00000307106 A0A0D9SFI3 127 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 C2CD4DB7Z1M9 353 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 GCOM1H8Y6P7 765 aaPredicted RBP13.69□□□□□ -0.22
SMIM4-201ENST00000307106 FIBPO43427 364 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 STAM2O75886 525 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 KRT37O76014 449 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 IBSPP21815 317 aaPredicted RBP13.69□□□□□ -0.22
SMIM4-201ENST00000307106 GRIK4Q16099 956 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 PLPP4Q5VZY2 271 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 LLGL2Q6P1M3 1020 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 THNSL1Q8IYQ7 743 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 STAG2Q8N3U4 1231 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 RASGRP4Q8TDF6 673 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 INPP4AQ96PE3 977 aaPredicted RBP13.69□□□□□ -0.22
SMIM4-201ENST00000307106 TMEM260Q9NX78 707 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 RTEL1Q9NZ71 1219 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 CDH22Q9UJ99 828 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 SQORQ9Y6N5 450 aa13.69□□□□□ -0.22
SMIM4-201ENST00000307106 MYH9P35579 1960 aaKnown RBP13.69□□□□□ -0.22
SMIM4-201ENST00000307106 MBLAC1A4D2B0 266 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-201ENST00000307106 FSCN2O14926 492 aa13.68□□□□□ -0.22
SMIM4-201ENST00000307106 ZBTB5O15062 677 aa13.68□□□□□ -0.22
SMIM4-201ENST00000307106 HOXB8P17481 243 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-201ENST00000307106 MARK3P27448 753 aa13.68□□□□□ -0.22
SMIM4-201ENST00000307106 TCF7P36402 384 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-201ENST00000307106 PAK2Q13177 524 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms