RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 RIOK1Q9BRS2 568 aaKnown RBP15.98■□□□□ 0.15
PTPN9-201ENST00000306726 NUP58Q9BVL2 599 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 BRCA1P38398 1863 aaKnown RBP15.98■□□□□ 0.15
PTPN9-201ENST00000306726 MYH8P13535 1937 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 CYTH3O43739 400 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 BAG3O95817 575 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 GBP2P32456 591 aaPredicted RBP15.98■□□□□ 0.15
PTPN9-201ENST00000306726 EPHB4P54760 987 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 PLTPP55058 493 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 PPP1R7Q15435 360 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 FAM83BQ5T0W9 1011 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 KCNK18Q7Z418 384 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 SPICE1Q8N0Z3 855 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 SUGT1Q9Y2Z0 365 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 WDR19Q8NEZ3 1342 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
PTPN9-201ENST00000306726 A0A087X0T9 212 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 POTEB3A0JP26 581 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 POTECB2RU33 542 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 RAD51CO43502 376 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 FAM228BP0C875 321 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 TCP1P17987 556 aaKnown RBP15.97■□□□□ 0.15
PTPN9-201ENST00000306726 KCNA3P22001 575 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 GNA11P29992 359 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 CYP2J2P51589 502 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 TUBB2AQ13885 445 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 LRRC14Q15048 493 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 FAM26FQ5R3K3 315 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 POTEBQ6S5H4 581 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 SH3RF1Q7Z6J0 888 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 CREG2Q8IUH2 290 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 NSUN4Q96CB9 384 aaKnown RBP15.97■□□□□ 0.15
PTPN9-201ENST00000306726 TRIM51Q9BSJ1 452 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 TUBB2BQ9BVA1 445 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 SLC37A4O43826 429 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 SLC9A1P19634 815 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 MMP14P50281 582 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 PRR16Q569H4 304 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 KIAA0895Q8NCT3 520 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 FKBP1AP62942 108 aaKnown RBP15.97■□□□□ 0.15
PTPN9-201ENST00000306726 TRIP13Q15645 432 aaPredicted RBP15.97■□□□□ 0.15
PTPN9-201ENST00000306726 PODNQ7Z5L7 613 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 SLC24A3Q9HC58 644 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 PCDHA12Q9UN75 941 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 SLX4Q8IY92 1834 aa15.97■□□□□ 0.15
PTPN9-201ENST00000306726 DDAH1O94760 285 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 IL1R1P14778 569 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 NR2F2P24468 414 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 ZNF746Q6NUN9 644 aaPredicted RBP15.96■□□□□ 0.15
PTPN9-201ENST00000306726 MMS22LQ6ZRQ5 1243 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 CEP95Q96GE4 821 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 TSGA10Q9BZW7 698 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 THAP9Q9H5L6 903 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 BCAS3Q9H6U6 928 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 COL4A1P02462 1669 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 IRS2Q9Y4H2 1338 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 TAF1P21675 1872 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 GCNT3O95395 438 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 MYBL1P10243 752 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 PEX19P40855 299 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 BTDP43251 543 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 FGFBP2Q9BYJ0 223 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 RAB34Q9BZG1 259 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 IL17RBQ9NRM6 502 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 EIF3HO15372 352 aaKnown RBP eCLIP15.96■□□□□ 0.15
PTPN9-201ENST00000306726 SORBS3O60504 671 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 SKAP2O75563 359 aaPredicted RBP15.96■□□□□ 0.15
PTPN9-201ENST00000306726 ITGA4P13612 1032 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 MAGOHP61326 146 aaKnown RBP15.96■□□□□ 0.15
PTPN9-201ENST00000306726 TNNC1P63316 161 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 HAUS3Q68CZ6 603 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 MAGOHBQ96A72 148 aaKnown RBP15.96■□□□□ 0.15
PTPN9-201ENST00000306726 PYM1Q9BRP8 204 aaKnown RBP15.96■□□□□ 0.15
PTPN9-201ENST00000306726 SH2D4AQ9H788 454 aa15.96■□□□□ 0.15
PTPN9-201ENST00000306726 FAM237AA0A1B0GTK4 181 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 POTEFA5A3E0 1075 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 TUBBP07437 444 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 POTEIP0CG38 1075 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 MTM1Q13496 603 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 NPY5RQ15761 445 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 POTEGQ6S5H5 508 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 POTEEQ6S8J3 1075 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 SLF2Q8IX21 1173 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 FBXL16Q8N461 479 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 PIGOQ8TEQ8 1089 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 DHTKD1Q96HY7 919 aaPredicted RBP15.95■□□□□ 0.14
PTPN9-201ENST00000306726 SNED1Q8TER0 1413 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 CACNA1SQ13698 1873 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 LSP1P33241 339 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 NF2P35240 595 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 MAP2K1Q02750 393 aaPredicted RBP15.95■□□□□ 0.14
PTPN9-201ENST00000306726 GIMAP8Q8ND71 665 aaPredicted RBP15.95■□□□□ 0.14
PTPN9-201ENST00000306726 TBK1Q9UHD2 729 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 FGFR1OPO95684 399 aaKnown RBP15.95■□□□□ 0.14
PTPN9-201ENST00000306726 MAN2A1Q16706 1144 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 CCDC84Q86UT8 332 aaPredicted RBP15.95■□□□□ 0.14
PTPN9-201ENST00000306726 CASKIN2Q8WXE0 1202 aa15.95■□□□□ 0.14
PTPN9-201ENST00000306726 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTPN9-201ENST00000306726 SNX24Q9Y343 169 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms