RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 RSRC2Q7L4I2 434 aaKnown RBP9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 CCDC105Q8IYK2 499 aa9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 C7orf31Q8N865 590 aa9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 MRRFQ96E11 262 aaKnown RBP9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 CEP170P1Q96L14 293 aa9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 TDRD3Q9H7E2 651 aaKnown RBP9.02□□□□□ -0.96
PCDHB1-201ENST00000306549 VIRMAQ69YN4 1812 aaKnown RBP9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 FOXO4P98177 505 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 VSIG1Q86XK7 387 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 ARRDC4Q8NCT1 418 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 SH3RF3Q8TEJ3 882 aaPredicted RBP9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 KMT5AQ9NQR1 393 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 ORC6Q9Y5N6 252 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 INO80B-WBP1J3KQ70 363 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 TRAPPC3O43617 180 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 TROVE2P10155 538 aaKnown RBP eCLIP9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 COG7P83436 770 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 GANCQ8TET4 914 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 SCYL1Q96KG9 808 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 ZDHHC15Q96MV8 337 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 NCOA5Q9HCD5 579 aaKnown RBP9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 M0R2C6 588 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 EPHX2P34913 555 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 CPT1AP50416 773 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 PPP4CP60510 307 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 CDKL2Q92772 493 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 RPGRIP1Q96KN7 1286 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 MYO10Q9HD67 2058 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 IFNA8P32881 189 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 TECP42680 631 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 EVCP57679 992 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 TAF11Q15544 211 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 EZH2Q15910 746 aaKnown RBP9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 GPRC5AQ8NFJ5 357 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 FAM71BQ8TC56 605 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 HDAC11Q96DB2 347 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 ZBED2Q9BTP6 218 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 SNX25Q9H3E2 840 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 GDF11O95390 407 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 MMP1P03956 469 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 PTK2Q05397 1052 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 LRRC63Q05C16 580 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 GPC2Q8N158 579 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 TRPV6Q9H1D0 765 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 Q9H521 79 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 ZSWIM5Q9P217 1185 aa9.02□□□□□ -0.97
PCDHB1-201ENST00000306549 A6NJR5 290 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 NBPF26B4DH59 902 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 EIF3DO15371 548 aaKnown RBP eCLIP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 ACTN1P12814 892 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 EEF1GP26641 437 aaKnown RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 GTF2A1P52655 376 aaPredicted RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 AP3M2P53677 418 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 FAM26FQ5R3K3 315 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 NBPF10Q6P3W6 841 aaKnown RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 RNF180Q86T96 592 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 NBPF15Q8N660 670 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 SPZ1Q9BXG8 430 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 NTSR2O95665 410 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 ANXA13P27216 316 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 KCNJ6P48051 423 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 KCNQ4P56696 695 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 SPP2Q13103 211 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 DDX27Q96GQ7 796 aaKnown RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 BAG1Q99933 345 aaPredicted RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 RARBP10826 455 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 PDE6CP51160 858 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 FBXW4P57775 412 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 DENND2CQ68D51 928 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 PROM2Q8N271 834 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 TTC25Q96NG3 672 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 MAF1Q9H063 256 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 DAAM1Q9Y4D1 1078 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 MEGF6O75095 1541 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 GYS1P13807 737 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 MAPK4P31152 587 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 PSMC2P35998 433 aaKnown RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 IFRD2Q12894 506 aaPredicted RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 ME3Q16798 604 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 SFMBT2Q5VUG0 894 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 NXNQ6DKJ4 435 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 MIGA2Q7L4E1 593 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 MAP7D3Q8IWC1 876 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 DPF2Q92785 391 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 MRIQ9BWK5 157 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 UBN1Q9NPG3 1134 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 KIAA1024Q9UPX6 916 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 FAN1Q9Y2M0 1017 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 SPEF2Q9C093 1822 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 TTC4O95801 387 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 PDCD2Q16342 344 aaPredicted RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 CTAGE3PQ8IX95 158 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 WHAMMQ8TF30 809 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 NELFBQ8WX92 580 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 NUDT12Q9BQG2 462 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 RPF1Q9H9Y2 349 aaKnown RBP9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 TBC1D7Q9P0N9 293 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 F5H6K3 240 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 EFNA5P52803 228 aa9.01□□□□□ -0.97
PCDHB1-201ENST00000306549 LMNB2Q03252 620 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms