RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 LZTFL1Q9NQ48 299 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 GOLGA6L9A6NEM1 432 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 TRIM21P19474 475 aaKnown RBP7.25□□□□□ -1.25
USP47-201ENST00000305481 LMNB1P20700 586 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 KCNA1Q09470 495 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 EPHA7Q15375 998 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 FIGNQ5HY92 759 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 RETREG2Q8NC44 543 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 TRERF1Q96PN7 1200 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 RIT2Q99578 217 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 PICK1Q9NRD5 415 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 PKD2L1Q9P0L9 805 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 ADAMTS5Q9UNA0 930 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 COL4A3BPQ9Y5P4 624 aa7.25□□□□□ -1.25
USP47-201ENST00000305481 DDX39AO00148 427 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 FGFR1OPO95684 399 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 ARHGAP25P42331 645 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 MARSP56192 900 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 GNG11P61952 73 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 KCNMA1Q12791 1236 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 PGM5Q15124 567 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 ANKRD7Q92527 254 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 CEP63Q96MT8 703 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 FIZ1Q96SL8 496 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 NUP58Q9BVL2 599 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 TEKT3Q9BXF9 490 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 AGO4Q9HCK5 861 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 DICER1Q9UPY3 1922 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 POLR2AP24928 1970 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 A0A1W2PQJ5 194 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 ZBED4O75132 1171 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 DDNO94850 711 aaPredicted RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 PRPF6O94906 941 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 EIF2AK2P19525 551 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 ZBED6P86452 979 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 FKBP15Q5T1M5 1219 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 NIPA1Q7RTP0 329 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 BANK1Q8NDB2 785 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 C12orf42Q96LP6 360 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 LXNQ9BS40 222 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 IKZF4Q9H2S9 585 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 AS3MTQ9HBK9 375 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 JADE2Q9NQC1 790 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 MAP3K20Q9NYL2 800 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 ZNF214Q9UL59 606 aaPredicted RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 TRAF3IP3Q9Y228 551 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 EPN1Q9Y6I3 576 aaPredicted RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 SBF1O95248 1867 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 USP2O75604 605 aaPredicted RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 NDUFA10O95299 355 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 ADAM9Q13443 819 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 PRKG1Q13976 671 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 KNOP1Q1ED39 458 aaKnown RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 BMT2Q1RMZ1 405 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 EDRF1Q3B7T1 1238 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 RNF207Q6ZRF8 634 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 KRT26Q7Z3Y9 468 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 TRIM59Q8IWR1 403 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 PXMP2Q9NR77 195 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 FAM207AQ9NSI2 230 aaPredicted RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 AFG3L2Q9Y4W6 797 aa7.24□□□□□ -1.25
USP47-201ENST00000305481 COL11A1P12107 1806 aaPredicted RBP7.24□□□□□ -1.25
USP47-201ENST00000305481 ATP9AO75110 1047 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 MUTP22033 750 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 DSG3P32926 999 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 TMEM132BQ14DG7 1078 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP47-201ENST00000305481 SMCR8Q8TEV9 937 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 PCMTD1Q96MG8 357 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 NACC1Q96RE7 527 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 RMDN3Q96TC7 470 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 PDCD2LQ9BRP1 358 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 FHDC1Q9C0D6 1143 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 OLFML3Q9NRN5 406 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP47-201ENST00000305481 PRDM4Q9UKN5 801 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 V9GYY5 206 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 ASTN1O14525 1302 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 ZMYM2Q9UBW7 1377 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 C19orf81C9J6K1 198 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 NOL4O94818 638 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 SLU7O95391 586 aaKnown RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 NMT1P30419 496 aaKnown RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 ZNF131P52739 623 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 HERVK_113P62684 666 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 MTMR1Q13613 665 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 BAATQ14032 418 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 NOL9Q5SY16 702 aaKnown RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 NSMFQ6X4W1 530 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 CATSPERGQ6ZRH7 1159 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 DAW1Q8N136 415 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 SAMD3Q8N6K7 520 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 RNF146Q9NTX7 359 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 TRIM10Q9UDY6 481 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 TFR2Q9UP52 801 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 PPP2R3BQ9Y5P8 575 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 PDXKO00764 312 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 TGFB1I1O43294 461 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 TBCAO75347 108 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms