RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ODF2LQ9ULJ1 636 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 KCNH4Q9UQ05 1017 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 KIF2AO00139 706 aaPredicted RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 MFAP3LO75121 409 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 TBCAO75347 108 aaKnown RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 NR3C2P08235 984 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 KRT76Q01546 638 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 RBL2Q08999 1139 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 ITGB3BPQ13352 177 aaPredicted RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 PPIL2Q13356 520 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 E4F1Q66K89 784 aaPredicted RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 EPM2AIP1Q7L775 607 aaPredicted RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 SCFD1Q8WVM8 642 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 PRIMPOLQ96LW4 560 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 IWS1Q96ST2 819 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 SENP7Q9BQF6 1050 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 LXNQ9BS40 222 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 NUP58Q9BVL2 599 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 KCTD10Q9H3F6 313 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 ZSWIM4Q9H7M6 989 aa11.75□□□□□ -0.53
CLP1-201ENST00000302731 DBR1Q9UK59 544 aaKnown RBP11.75□□□□□ -0.53
CLP1-201ENST00000302731 NPHP3-ACAD11A0A0J9YXS1 232 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 EIF3DO15371 548 aaKnown RBP eCLIP11.74□□□□□ -0.53
CLP1-201ENST00000302731 GYPCP04921 128 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 MYCLP12524 364 aaPredicted RBP11.74□□□□□ -0.53
CLP1-201ENST00000302731 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
CLP1-201ENST00000302731 GUCY2CP25092 1073 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 MTIF2P46199 727 aaKnown RBP11.74□□□□□ -0.53
CLP1-201ENST00000302731 ZNF131P52739 623 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 ADKP55263 362 aaKnown RBP11.74□□□□□ -0.53
CLP1-201ENST00000302731 MARSP56192 900 aaKnown RBP11.74□□□□□ -0.53
CLP1-201ENST00000302731 LRRC41Q15345 812 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 MAN2A1Q16706 1144 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 FIGNQ5HY92 759 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 NYAP1Q6ZVC0 841 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 ARMC9Q7Z3E5 817 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 RIOX2Q8IUF8 465 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 DNERQ8NFT8 737 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 ZFP91Q96JP5 570 aaPredicted RBP11.74□□□□□ -0.53
CLP1-201ENST00000302731 ERGIC2Q96RQ1 377 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 RUSC1Q9BVN2 902 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 TAF1DQ9H5J8 278 aaPredicted RBP11.74□□□□□ -0.53
CLP1-201ENST00000302731 A1CFQ9NQ94 594 aaKnown RBP11.74□□□□□ -0.53
CLP1-201ENST00000302731 TCEAL9Q9UHQ7 104 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 TRAF3IP3Q9Y228 551 aa11.74□□□□□ -0.53
CLP1-201ENST00000302731 PFASO15067 1338 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 UBE4BO95155 1302 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 WDR64B1ANS9 1081 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 PDXKO00764 312 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 FAM13AO94988 1023 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 COPB2P35606 906 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 QARSP47897 775 aaKnown RBP11.73□□□□□ -0.53
CLP1-201ENST00000302731 PTPN21Q16825 1174 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 MIIPQ5JXC2 388 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 FKBP15Q5T1M5 1219 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 TREML2Q5T2D2 321 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 ZNF746Q6NUN9 644 aaPredicted RBP11.73□□□□□ -0.53
CLP1-201ENST00000302731 DLK2Q6UY11 383 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.73□□□□□ -0.53
CLP1-201ENST00000302731 SFR1Q86XK3 245 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 CREBRFQ8IUR6 639 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 C4orf19Q8IY42 314 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 GLIS3Q8NEA6 775 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 PIGOQ8TEQ8 1089 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 NOC4LQ9BVI4 516 aaKnown RBP11.73□□□□□ -0.53
CLP1-201ENST00000302731 TIPINQ9BVW5 301 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 ELP3Q9H9T3 547 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 WRAP73Q9P2S5 460 aaPredicted RBP11.73□□□□□ -0.53
CLP1-201ENST00000302731 NFASCO94856 1347 aa11.73□□□□□ -0.53
CLP1-201ENST00000302731 TESPA1A2RU30 521 aaPredicted RBP11.72□□□□□ -0.53
CLP1-201ENST00000302731 ARHGEF35A5YM69 484 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 GOLGA6L9A6NEM1 432 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 B4DLN1 442 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 ZSCAN12O43309 604 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 CASP14P31944 242 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
CLP1-201ENST00000302731 RAD51AP2Q09MP3 1159 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 TBC1D8BQ0IIM8 1120 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 PLS1Q14651 629 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 PTPN14Q15678 1187 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 GPR162Q16538 588 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 KNOP1Q1ED39 458 aaKnown RBP11.72□□□□□ -0.53
CLP1-201ENST00000302731 VWA3BQ502W6 1294 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 LDLRAD1Q5T700 205 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
CLP1-201ENST00000302731 SMAP1Q8IYB5 467 aaPredicted RBP11.72□□□□□ -0.53
CLP1-201ENST00000302731 FGFBP2Q9BYJ0 223 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 ZHX3Q9H4I2 956 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 PARVGQ9HBI0 331 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 TBC1D7Q9P0N9 293 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 AGTPBP1Q9UPW5 1226 aa11.72□□□□□ -0.53
CLP1-201ENST00000302731 USP27XA6NNY8 438 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
CLP1-201ENST00000302731 TRAF5O00463 557 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 CALUO43852 315 aaPredicted RBP11.71□□□□□ -0.53
CLP1-201ENST00000302731 DKC1O60832 514 aaKnown RBP eCLIP11.71□□□□□ -0.53
CLP1-201ENST00000302731 MAPTP10636 758 aaKnown RBP11.71□□□□□ -0.53
CLP1-201ENST00000302731 TNNT1P13805 278 aa11.71□□□□□ -0.53
CLP1-201ENST00000302731 FXR1P51114 621 aaKnown RBP eCLIP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms