RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TTC13Q8NBP0 860 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 EAF2Q96CJ1 260 aaPredicted RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ZC4H2Q9NQZ6 224 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 DISC1Q9NRI5 854 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 USP17L12C9JPN9 530 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 USP17L21D6R901 530 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 GYG2O15488 501 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 LPXNO60711 386 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 CALB1P05937 261 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 IFNAR1P17181 557 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 E2F5Q15329 346 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ACAD11Q709F0 780 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ADAT2Q7Z6V5 191 aaKnown RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 GJA10Q969M2 543 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 MTBPQ96DY7 904 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 NUDCD1Q96RS6 583 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 USP40Q9NVE5 1235 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 STRIP2Q9ULQ0 834 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 NLRP1Q9C000 1473 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PXDNLA1KZ92 1463 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 ITKQ08881 620 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 DARS2Q6PI48 645 aaKnown RBP8.22□□□□□ -1.09
SF3B3-201ENST00000302516 NIM1KQ8IY84 436 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 PAGE5Q96GU1 130 aa8.22□□□□□ -1.09
SF3B3-201ENST00000302516 TOM1L1O75674 476 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 ARL13BQ3SXY8 428 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 NSMFQ6X4W1 530 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 EPM2AIP1Q7L775 607 aaPredicted RBP8.21□□□□□ -1.09
SF3B3-201ENST00000302516 PARP9Q8IXQ6 854 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 GDAP1Q8TB36 358 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 ZNF521Q96K83 1311 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 H0YIN7 160 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 PRPSAP2O60256 369 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 NFKBIAP25963 317 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 RARS2Q5T160 578 aaKnown RBP8.21□□□□□ -1.09
SF3B3-201ENST00000302516 PYROXD1Q8WU10 500 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 PITPNM3Q9BZ71 974 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 NDST4Q9H3R1 872 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 CYP26B1Q9NR63 512 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 hCG_1642624A0A1W2PR95 340 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 ARHGEF9O43307 516 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 CCND2P30279 289 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 CERKLQ49MI3 558 aaPredicted RBP8.21□□□□□ -1.09
SF3B3-201ENST00000302516 MTA3Q9BTC8 594 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 NFU1Q9UMS0 254 aa8.21□□□□□ -1.09
SF3B3-201ENST00000302516 TESPA1A2RU30 521 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 ADD1P35611 737 aaKnown RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 HIBCHQ6NVY1 386 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 EP400NLQ6ZTU2 488 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SLITRK6Q9H5Y7 841 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SLC12A6Q9UHW9 1150 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 APOBEC2Q9Y235 224 aaKnown RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 PFASO15067 1338 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 MAGI3Q5TCQ9 1506 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SLC26A4O43511 780 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 ICA1LQ8NDH6 482 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 PLEKHG3A1L390 1219 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 KPNA7A9QM74 516 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 PCYT1AP49585 367 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 ARHGDIAP52565 204 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 POLE2P56282 527 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 THOC5Q13769 683 aaKnown RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 CYP4F22Q6NT55 531 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SYDE1Q6ZW31 735 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 ZNF710Q8N1W2 664 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 ABTB1Q969K4 478 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 ZBTB18Q99592 522 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 NRKQ7Z2Y5 1582 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SERPINB2P05120 415 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SERPINB4P48594 390 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SLFN12LQ6IEE8 588 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 STAMBPL1Q96FJ0 436 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 ATP6V1G3Q96LB4 118 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 ALDH8A1Q9H2A2 487 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SLC38A10Q9HBR0 1119 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 SMYD2Q9NRG4 433 aa8.21□□□□□ -1.1
SF3B3-201ENST00000302516 FRMPD2Q68DX3 1309 aaPredicted RBP8.21□□□□□ -1.1
SF3B3-201ENST00000302516 GMNCA6NCL1 334 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 RASSF10A6NK89 507 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 E9PMD0 336 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 ZBTB24O43167 697 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 FGGP02679 453 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 CA4P22748 312 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 CHRNA3P32297 505 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 RPS8P62241 208 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 WDR75Q8IWA0 830 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 PRPF38AQ8NAV1 312 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 FAM129AQ9BZQ8 928 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 NOVA2Q9UNW9 492 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 XDHP47989 1333 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 MAP3K15Q6ZN16 1313 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 CASP2P42575 452 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 CEBPAP49715 358 aaPredicted RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 SPOPLQ6IQ16 392 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 MB21D1Q8N884 522 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 SLC7A3Q8WY07 619 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 HMGB3O15347 200 aaKnown RBP8.2□□□□□ -1.1
SF3B3-201ENST00000302516 SMARCA1P28370 1054 aa8.2□□□□□ -1.1
SF3B3-201ENST00000302516 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms