RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 KCNB2Q92953 911 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 RBM17Q96I25 401 aaKnown RBP8.37□□□□□ -1.07
LRRC28-201ENST00000301981 GJA3Q9Y6H8 435 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 XKR9Q5GH70 373 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 C10orf76Q5T2E6 689 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 MCTP2Q6DN12 878 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 EP400NLQ6ZTU2 488 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 SEPT14Q6ZU15 432 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 SGMS1Q86VZ5 419 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 RILPQ96NA2 401 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 PRMT1Q99873 361 aaKnown RBP8.37□□□□□ -1.07
LRRC28-201ENST00000301981 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 PNMA2Q9UL42 364 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 CD58P19256 250 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 NMT1P30419 496 aaKnown RBP8.37□□□□□ -1.07
LRRC28-201ENST00000301981 ARL1P40616 181 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-201ENST00000301981 ICA1Q05084 483 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 PPP2R5BQ15173 497 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 MDH1BQ5I0G3 518 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 MMS22LQ6ZRQ5 1243 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 STMN2Q93045 179 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 CEP63Q96MT8 703 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 FMO2Q99518 471 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 PLVAPQ9BX97 442 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 RAB17Q9H0T7 212 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 EHMT1Q9H9B1 1298 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 USP21Q9UK80 565 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 CAPN11Q9UMQ6 739 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 SNX12Q9UMY4 172 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 ZNF148Q9UQR1 794 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 APBA3O96018 575 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 KLRC1P26715 233 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 KCNJ1P48048 391 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 TRADDQ15628 312 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 ZC2HC1CQ53FD0 456 aaPredicted RBP8.37□□□□□ -1.07
LRRC28-201ENST00000301981 PPP1R18Q6NYC8 613 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 EEPD1Q7L9B9 569 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 MIER3Q7Z3K6 550 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 ZNF354CQ86Y25 554 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 VPS52Q8N1B4 723 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 SLC30A5Q8TAD4 765 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 IL17RAQ96F46 866 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 ATP8A2Q9NTI2 1148 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.37□□□□□ -1.07
LRRC28-201ENST00000301981 WDR70Q9NW82 654 aa8.37□□□□□ -1.07
LRRC28-201ENST00000301981 NOC2LQ9Y3T9 749 aaKnown RBP8.37□□□□□ -1.07
LRRC28-201ENST00000301981 EVI5O60447 810 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 PRPHP41219 470 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 SCARA5Q6ZMJ2 495 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 FAM196AQ6ZSG2 479 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 FBXO11Q86XK2 927 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 ADSSL1Q8N142 457 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 KLHL29Q96CT2 875 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 CYTH2Q99418 400 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 STMN4Q9H169 189 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 ADGRB2O60241 1585 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 RCCD1A6NED2 376 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 PIK3R2O00459 728 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 MYO1EQ12965 1108 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 MUM1Q2TAK8 710 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 WDR44Q5JSH3 913 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 SYCE1Q8N0S2 351 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 ZNF579Q8NAF0 562 aaKnown RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 GLG1Q92896 1179 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 YIPF3Q9GZM5 350 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 ZMYND12Q9H0C1 365 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 FAM217BQ9NTX9 383 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 DNAJC12Q9UKB3 198 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 HPSEQ9Y251 543 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 GOLGA8RI6L899 631 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 NTRK3Q16288 839 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 TAOK1Q7L7X3 1001 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 TXNRD3Q86VQ6 643 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 TRIM9Q9C026 710 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 TSKSQ9UJT2 592 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 KITP10721 976 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 BCRP11274 1271 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 LONRF1Q17RB8 773 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 C3orf67Q6ZVT6 689 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 SRRM1Q8IYB3 904 aaKnown RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 OGFOD1Q8N543 542 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 ZNF473Q8WTR7 871 aaKnown RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 HVCN1Q96D96 273 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 TRIM7Q9C029 511 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 CPSF2Q9P2I0 782 aaKnown RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 DCTN4Q9UJW0 460 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 KIDINS220Q9ULH0 1771 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 CLTCQ00610 1675 aaKnown RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 MTMR3Q13615 1198 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 SGO2Q562F6 1265 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 SAAL1Q96ER3 474 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 CARD10Q9BWT7 1032 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 NT5C3AQ9H0P0 336 aa8.36□□□□□ -1.07
LRRC28-201ENST00000301981 ZNF335Q9H4Z2 1342 aaPredicted RBP8.36□□□□□ -1.07
LRRC28-201ENST00000301981 ARHGAP42A6NI28 874 aa8.35□□□□□ -1.07
LRRC28-201ENST00000301981 PDE2AO00408 941 aaPredicted RBP8.35□□□□□ -1.07
LRRC28-201ENST00000301981 SLC37A4O43826 429 aa8.35□□□□□ -1.07
LRRC28-201ENST00000301981 MYBP10242 640 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms