RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RABGGTAQ92696 567 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ZNF341Q9BYN7 854 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 COPRSQ9NQ92 184 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NFU1Q9UMS0 254 aa14.64□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RNF207Q6ZRF8 634 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 GDAQ9Y2T3 454 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 STMN1P16949 149 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 LMNB2Q03252 620 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PDXDC2PQ6P474 469 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PARVGQ9HBI0 331 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SNAP23O00161 211 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PPFIA2O75334 1257 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SERPING1P05155 500 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CDK8P49336 464 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 EPHB1P54762 984 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 LEMD3Q9Y2U8 911 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SYNDIG1LA6NDD5 238 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TRIM67Q6ZTA4 783 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 OR6B3Q8NGW1 331 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 GANCQ8TET4 914 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NCAPGQ9BPX3 1015 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SHANK2Q9UPX8 1470 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SLC8A1P32418 973 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SZRD1Q7Z422 152 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ABTB1Q969K4 478 aaPredicted RBP14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SERPINB13Q9UIV8 391 aa14.63□□□□□ -0.07
CHRFAM7A-201ENST00000299847 EIF4E1BA6NMX2 242 aaKnown RBP14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 GOLGA8CPA6NN73 597 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ART3Q13508 389 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 KRT27Q7Z3Y8 459 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 THNSL1Q8IYQ7 743 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 FAF2Q96CS3 445 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RUNDC3BQ96NL0 473 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SPZ1Q9BXG8 430 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RPF1Q9H9Y2 349 aaKnown RBP14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ABCB6Q9NP58 842 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NEDD4P46934 1319 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MED7O43513 233 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PSMA2P25787 234 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PPP6R3Q5H9R7 873 aaPredicted RBP14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SLC27A3Q5K4L6 730 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MLXIPLQ9NP71 852 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MOSPD1Q9UJG1 213 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 USP17L5A8MUK1 530 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ANKRD20A4Q4UJ75 823 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ANKRD20A8PQ5CZ79 823 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ANKRD20A2Q5SQ80 823 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ANKRD20A1Q5TYW2 823 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 DSTYKQ6XUX3 929 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ATP10DQ9P241 1426 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 EVI5O60447 810 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NDUFA10O95299 355 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MXI1P50539 228 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RASGRF1Q13972 1273 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 BBS5Q8N3I7 341 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MAGEF1Q9HAY2 307 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 STK17AQ9UEE5 414 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ABCB11O95342 1321 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PSAPP07602 524 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SLFN14P0C7P3 912 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 KIF19Q2TAC6 998 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 AK8Q96MA6 479 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TMEM206Q9H813 350 aa14.62□□□□□ -0.07
CHRFAM7A-201ENST00000299847 POTEMA6NI47 508 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SUSD4Q5VX71 490 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MB21D1Q8N884 522 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CUEDC2Q9H467 287 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PRDM5Q9NQX1 630 aaPredicted RBP14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TMEM260Q9NX78 707 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PLEKHG3A1L390 1219 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 XPOTO43592 962 aaKnown RBP14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ANXA13P27216 316 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 USP14P54578 494 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 RESTQ13127 1097 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 KRT31Q15323 416 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 NLRP10Q86W26 655 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ZMYND12Q9H0C1 365 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 BHMT2Q9H2M3 363 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 STAP2Q9UGK3 403 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ADAMTS12P58397 1594 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 CLCN6P51797 869 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TRIM11Q96F44 468 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 EPS15L1Q9UBC2 864 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PALMO75781 387 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 FKBP3Q00688 224 aaKnown RBP14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 VSTM4Q8IW00 320 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PDCD6IPQ8WUM4 868 aaKnown RBP14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 WDR11Q9BZH6 1224 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 THAP9Q9H5L6 903 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 KANSL2Q9H9L4 492 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ORC6Q9Y5N6 252 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PHLPP2Q6ZVD8 1323 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PMLP29590 882 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 GFPT1Q06210 699 aaPredicted RBP14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 MYO1EQ12965 1108 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 PSPC1Q8WXF1 523 aaKnown RBP14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 TTC17Q96AE7 1141 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 KLHL29Q96CT2 875 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 SLC12A6Q9UHW9 1150 aa14.61□□□□□ -0.07
CHRFAM7A-201ENST00000299847 ZBED1O96006 694 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms