RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 HIC1Q14526 733 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 HSP90AA2PQ14568 343 aaPredicted RBP13.65□□□□□ -0.22
HMGB2-201ENST00000296503 SHHQ15465 462 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 LRCH2Q5VUJ6 765 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 FAM160B1Q5W0V3 765 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 ZNF746Q6NUN9 644 aaPredicted RBP13.65□□□□□ -0.22
HMGB2-201ENST00000296503 SWSAP1Q6NVH7 229 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 PLPPR4Q7Z2D5 763 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 SLC5A5Q92911 643 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 TNPO1Q92973 898 aaKnown RBP13.65□□□□□ -0.22
HMGB2-201ENST00000296503 GJA10Q969M2 543 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 PCYT2Q99447 389 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 RIT2Q99578 217 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 TEKT3Q9BXF9 490 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 KIF3AQ9Y496 699 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 TRIOBPQ9H2D6 2365 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 EMSYQ7Z589 1322 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 FAM205CA6NFA0 338 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 TREHO43280 583 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 GCFC2P16383 781 aaKnown RBP13.65□□□□□ -0.22
HMGB2-201ENST00000296503 EPHB4P54760 987 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 PPP4R3AQ6IN85 833 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 RPUSD2Q8IZ73 545 aaKnown RBP13.65□□□□□ -0.22
HMGB2-201ENST00000296503 FBXO18Q8NFZ0 1043 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 TNFRSF25Q93038 417 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 WNT8AQ9H1J5 351 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 ZNF302Q9NR11 478 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 TRPC6Q9Y210 931 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 PCDHA10Q9Y5I2 948 aa13.65□□□□□ -0.22
HMGB2-201ENST00000296503 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 DDX11L8A8MPP1 907 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 PITPNM1O00562 1244 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 CHMP2AO43633 222 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 PSAPP07602 524 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 TPM2P07951 284 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 IGBP1P78318 339 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 PPFIA1Q13136 1202 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 C9orf50Q5SZB4 431 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 PDXDC2PQ6P474 469 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 SMAP1Q8IYB5 467 aaPredicted RBP13.64□□□□□ -0.23
HMGB2-201ENST00000296503 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 MBOAT7Q96N66 472 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 CTAGE1Q96RT6 745 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 IL23AQ9NPF7 189 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.64□□□□□ -0.23
HMGB2-201ENST00000296503 TRIP12Q14669 1992 aaPredicted RBP13.64□□□□□ -0.23
HMGB2-201ENST00000296503 LTBP2Q14767 1821 aa13.64□□□□□ -0.23
HMGB2-201ENST00000296503 SLC37A4O43826 429 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 BAG4O95429 457 aaKnown RBP13.63□□□□□ -0.23
HMGB2-201ENST00000296503 IQCF3P0C7M6 154 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 INSRRP14616 1297 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 ATP2B1P20020 1258 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 PLCB4Q15147 1175 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 TRMT1LQ7Z2T5 733 aaKnown RBP13.63□□□□□ -0.23
HMGB2-201ENST00000296503 DEFB128Q7Z7B8 93 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 CCDC60Q8IWA6 550 aaPredicted RBP13.63□□□□□ -0.23
HMGB2-201ENST00000296503 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■■□□ 18.2
HMGB2-201ENST00000296503 DISC1Q9NRI5 854 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 SMC3Q9UQE7 1217 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 IGKV6D-21A0A0A0MT36 114 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 POTEB3A0JP26 581 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 WDR64B1ANS9 1081 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 PSMD10O75832 226 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 FGBP02675 491 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 CKBP12277 381 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 SELPP16109 830 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 GJB2P29033 226 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 THPOP40225 353 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 SLC26A2P50443 739 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 TERF1P54274 439 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 GRIK4Q16099 956 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 POTEBQ6S5H4 581 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 ZNF365Q70YC5 407 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 C16orf59Q7L2K0 433 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 MIER3Q7Z3K6 550 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 SERINC5Q86VE9 423 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 AFAP1L1Q8TED9 768 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 LMBR1Q8WVP7 490 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 DHX38Q92620 1227 aaKnown RBP13.63□□□□□ -0.23
HMGB2-201ENST00000296503 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.231e-18■■□□□ 11.8
HMGB2-201ENST00000296503 FOXP1Q9H334 677 aaPredicted RBP13.63□□□□□ -0.23
HMGB2-201ENST00000296503 UNC45AQ9H3U1 944 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 GABBR1Q9UBS5 961 aa13.63□□□□□ -0.23
HMGB2-201ENST00000296503 HOXC8P31273 242 aa13.62□□□□□ -0.23
HMGB2-201ENST00000296503 SFNP31947 248 aa13.62□□□□□ -0.23
HMGB2-201ENST00000296503 JAK3P52333 1124 aa13.62□□□□□ -0.23
HMGB2-201ENST00000296503 TMEM240Q5SV17 173 aa13.62□□□□□ -0.23
HMGB2-201ENST00000296503 PSRC1Q6PGN9 363 aaPredicted RBP13.62□□□□□ -0.23
HMGB2-201ENST00000296503 ETNPPLQ8TBG4 499 aa13.62□□□□□ -0.23
HMGB2-201ENST00000296503 RNPC3Q96LT9 517 aaKnown RBP13.62□□□□□ -0.23
HMGB2-201ENST00000296503 FAM20AQ96MK3 541 aa13.62□□□□□ -0.23
HMGB2-201ENST00000296503 H3BQV1 296 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 HBP1O60381 514 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 RFC2P35250 354 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 ZNF618Q5T7W0 954 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 LRRC8DQ7L1W4 858 aa13.61□□□□□ -0.23
HMGB2-201ENST00000296503 POTEDQ86YR6 584 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms