RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 ATG7O95352 703 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 SUPT20HL2P0C7V6 817 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 JAK3P52333 1124 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 GRB10Q13322 594 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 POTEGQ6S5H5 508 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 TRIM50Q86XT4 487 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 RASSF8Q8NHQ8 419 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 CCSER1Q9C0I3 900 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 AP5M1Q9H0R1 490 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 FAM13BQ9NYF5 915 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 GABBR1Q9UBS5 961 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 DDX20Q9UHI6 824 aaKnown RBP16.99■□□□□ 0.31
CCDC140-201ENST00000295226 KCNH3Q9ULD8 1083 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 POLR2DO15514 142 aaKnown RBP16.98■□□□□ 0.31
CCDC140-201ENST00000295226 NR1I2O75469 434 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 PSAPP07602 524 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 RARBP10826 455 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 SFNP31947 248 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 PSMC6P62333 389 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 MIS18BP1Q6P0N0 1132 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 KCNK18Q7Z418 384 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 SMAP1Q8IYB5 467 aaPredicted RBP16.98■□□□□ 0.31
CCDC140-201ENST00000295226 PPTC7Q8NI37 304 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 ERMNQ8TAM6 284 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 EMID1Q96A84 441 aaPredicted RBP16.98■□□□□ 0.31
CCDC140-201ENST00000295226 KIAA1024Q9UPX6 916 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 HPSEQ9Y251 543 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 WDR81Q562E7 1941 aa16.98■□□□□ 0.31
CCDC140-201ENST00000295226 CTAGE5O15320 804 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 MMP3P08254 477 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 C6orf222P0C671 652 aaPredicted RBP16.97■□□□□ 0.31
CCDC140-201ENST00000295226 ZNF286BP0CG31 522 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 PLCG1P19174 1290 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 RPA1P27694 616 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 DHX58Q96C10 678 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 LXNQ9BS40 222 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC140-201ENST00000295226 XPNPEP3Q9NQH7 507 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 DDX19AQ9NUU7 478 aaKnown RBP16.97■□□□□ 0.31
CCDC140-201ENST00000295226 SYNRGQ9UMZ2 1314 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.97■□□□□ 0.31
CCDC140-201ENST00000295226 TMEM150BA6NC51 233 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 ZNF862O60290 1169 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 P4HBP07237 508 aaKnown RBP16.97■□□□□ 0.31
CCDC140-201ENST00000295226 CCL5P13501 91 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 MARK3P27448 753 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 TXLNAP40222 546 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 SYKP43405 635 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 SNW1Q13573 536 aaKnown RBP16.97■□□□□ 0.31
CCDC140-201ENST00000295226 LHX8Q68G74 356 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 ENGASEQ8NFI3 743 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 PIGOQ8TEQ8 1089 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 PPP1R13LQ8WUF5 828 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 SH2D3AQ9BRG2 576 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 POLR3CQ9BUI4 534 aaPredicted RBP16.97■□□□□ 0.31
CCDC140-201ENST00000295226 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 ZNF302Q9NR11 478 aa16.97■□□□□ 0.31
CCDC140-201ENST00000295226 IGKV6D-21A0A0A0MT36 114 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 A6NJR5 290 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 E9PMD0 336 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 ATP4AP20648 1035 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 QARSP47897 775 aaKnown RBP16.96■□□□□ 0.31
CCDC140-201ENST00000295226 GJA9P57773 515 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 PKN2Q16513 984 aaKnown RBP16.96■□□□□ 0.31
CCDC140-201ENST00000295226 FSCN1Q16658 493 aaKnown RBP16.96■□□□□ 0.31
CCDC140-201ENST00000295226 LONRF3Q496Y0 759 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 GNASQ5JWF2 1037 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 RRAGBQ5VZM2 374 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 HAUS3Q68CZ6 603 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 PDXDC2PQ6P474 469 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 CCDC73Q6ZRK6 1079 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 FMR1NBQ8N0W7 255 aaPredicted RBP16.96■□□□□ 0.31
CCDC140-201ENST00000295226 RDM1Q8NG50 284 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 GLG1Q92896 1179 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 CALML4Q96GE6 196 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 CDK5RAP3Q96JB5 506 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 RNF208Q9H0X6 261 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 TUFT1Q9NNX1 390 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 Q9Y3F1 56 aa16.96■□□□□ 0.31
CCDC140-201ENST00000295226 MYH9P35579 1960 aaKnown RBP16.95■□□□□ 0.3
CCDC140-201ENST00000295226 FAM237AA0A1B0GTK4 181 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 ZNF202O95125 648 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 LGALS2P05162 132 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 MYL3P08590 195 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 STAT5BP51692 787 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 CHMP4BP1P59074 171 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 ZNF445P59923 1031 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 DHX8Q14562 1220 aaKnown RBP16.95■□□□□ 0.3
CCDC140-201ENST00000295226 TMEM119Q4V9L6 283 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 NAALADL2Q58DX5 795 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 STAMQ92783 540 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 CCDC39Q9UFE4 941 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 SERTAD1Q9UHV2 236 aa16.95■□□□□ 0.3
CCDC140-201ENST00000295226 ADAMTS4O75173 837 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 PPFIA4O75335 1185 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 LGR5O75473 907 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 STAT6P42226 847 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 PSMC5P62195 406 aa16.94■□□□□ 0.3
CCDC140-201ENST00000295226 FAM160A1Q05DH4 1040 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms