RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 WDR17Q8IZU2 1322 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 TUBB4AP04350 444 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 RASSF7Q02833 373 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 MORC3Q14149 939 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 CCDC184Q52MB2 194 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 C17orf53Q8N3J3 647 aaPredicted RBP13.35□□□□□ -0.27
SLX4-201ENST00000294008 DCUN1D1Q96GG9 259 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 KIAA1024Q9UPX6 916 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 P4HA2O15460 535 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 ZBED1O96006 694 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 RPS6KB1P23443 525 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 CYP27A1Q02318 531 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 ITPRIPL1Q6GPH6 555 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 FGD2Q7Z6J4 655 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 MED4Q9NPJ6 270 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 SNX5Q9Y5X3 404 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
SLX4-201ENST00000294008 ATAD2BQ9ULI0 1458 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 GOLGA8IPA6NC78 632 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 GOLGA8JA6NMD2 632 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 TDRD7Q8NHU6 1098 aaKnown RBP13.35□□□□□ -0.27
SLX4-201ENST00000294008 TBC1D22AQ8WUA7 517 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 TSC1Q92574 1164 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 COA7Q96BR5 231 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 FAF2Q96CS3 445 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 DESI2Q9BSY9 194 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 FGD6Q6ZV73 1430 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 SCG2P13521 617 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 GYG1P46976 350 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 TRPC1P48995 793 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 PHKG1Q16816 387 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 KRT26Q7Z3Y9 468 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 DDIASQ8IXT1 998 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 SLC16A2P36021 539 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 ZAP70P43403 619 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 OCA2Q04671 838 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 DEUP1Q05D60 604 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 E2F5Q15329 346 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 TAF1BQ53T94 588 aaPredicted RBP13.35□□□□□ -0.27
SLX4-201ENST00000294008 MFN1Q8IWA4 741 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 PPP2R3CQ969Q6 453 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 KLHL29Q96CT2 875 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
SLX4-201ENST00000294008 ST8SIA6P61647 398 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 BBS9Q3SYG4 887 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 GJC2Q5T442 439 aaPredicted RBP13.34□□□□□ -0.27
SLX4-201ENST00000294008 SDE2Q6IQ49 451 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 TRIM48Q8IWZ4 208 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 ZC3H4Q9UPT8 1303 aaKnown RBP13.34□□□□□ -0.27
SLX4-201ENST00000294008 DARSP14868 501 aaKnown RBP13.34□□□□□ -0.27
SLX4-201ENST00000294008 NGRNQ9NPE2 291 aaKnown RBP13.34□□□□□ -0.27
SLX4-201ENST00000294008 LARSQ9P2J5 1176 aaKnown RBP13.34□□□□□ -0.27
SLX4-201ENST00000294008 PCDHGB4Q9UN71 923 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 SPDYAQ5MJ70 313 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 FBXO41Q8TF61 875 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 RPAP3Q9H6T3 665 aaPredicted RBP13.34□□□□□ -0.27
SLX4-201ENST00000294008 C5orf58C9J3I9 102 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 ZMYND10O75800 440 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 BPIFB4P59827 614 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 LRRC31Q6UY01 552 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 TRIM69Q86WT6 500 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 RMDN1Q96DB5 314 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 AIPL1Q9NZN9 384 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 USP17L12C9JPN9 530 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 USP17L21D6R901 530 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 MAP3K13O43283 966 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 AFPP02771 609 aaKnown RBP13.34□□□□□ -0.27
SLX4-201ENST00000294008 NLRP12P59046 1061 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 PSMC5P62195 406 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 PPARAQ07869 468 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 C8orf58Q8NAV2 365 aa13.34□□□□□ -0.27
SLX4-201ENST00000294008 FAM47DPA6NHR8 397 aa13.33□□□□□ -0.27
SLX4-201ENST00000294008 IGHDP01880 384 aa13.33□□□□□ -0.27
SLX4-201ENST00000294008 MAP4P27816 1152 aaKnown RBP13.33□□□□□ -0.27
SLX4-201ENST00000294008 MAP2K2P36507 400 aa13.33□□□□□ -0.27
SLX4-201ENST00000294008 ANKRD40Q6AI12 368 aa13.33□□□□□ -0.27
SLX4-201ENST00000294008 CCDC84Q86UT8 332 aaPredicted RBP13.33□□□□□ -0.27
SLX4-201ENST00000294008 OGFRQ9NZT2 677 aa13.33□□□□□ -0.27
SLX4-201ENST00000294008 COL4A3BPQ9Y5P4 624 aa13.33□□□□□ -0.27
SLX4-201ENST00000294008 KIF21BO75037 1637 aa13.33□□□□□ -0.27
SLX4-201ENST00000294008 DFFAO00273 331 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 KCNA2P16389 499 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 KRT24Q2M2I5 525 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 TBC1D19Q8N5T2 526 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 FAM161BQ96MY7 647 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 DBNDD2Q9BQY9 259 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 EXOC3L4Q17RC7 722 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 DCAF5Q96JK2 942 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.28
SLX4-201ENST00000294008 AARSP49588 968 aaKnown RBP eCLIP13.33□□□□□ -0.28
SLX4-201ENST00000294008 NCALDP61601 193 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 GUCY2DQ02846 1103 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 INAQ16352 499 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 AOC3Q16853 763 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 MTHFSDQ2M296 383 aaKnown RBP13.33□□□□□ -0.28
SLX4-201ENST00000294008 ZNF280CQ8ND82 737 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 AGR3Q8TD06 166 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 PPEF1O14829 653 aaPredicted RBP13.33□□□□□ -0.28
SLX4-201ENST00000294008 SLC27A2O14975 620 aa13.33□□□□□ -0.28
SLX4-201ENST00000294008 ADCY3O60266 1144 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms