RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 FAM86B2P0C5J1 330 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 CASP5P51878 434 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 ADAM9Q13443 819 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 RRP1BQ14684 758 aaKnown RBP16.61■□□□□ 0.25
CCDC116-201ENST00000292779 Q4G0T1 1027 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 SFMBT2Q5VUG0 894 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 GMCL1Q96IK5 515 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 ALS2CR12Q96Q35 445 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 TAOK3Q9H2K8 898 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 SPDYE3A6NKU9 549 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 SPATA31C1P0DKV0 1188 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
CCDC116-201ENST00000292779 SLC9C1Q4G0N8 1177 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 GRIPAP1Q4V328 841 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 SYDE2Q5VT97 1194 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 IQCEQ6IPM2 695 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 NFRKBQ6P4R8 1299 aa16.61■□□□□ 0.25
CCDC116-201ENST00000292779 ZC3H3Q8IXZ2 948 aaKnown RBP16.61■□□□□ 0.25
CCDC116-201ENST00000292779 NUCKS1Q9H1E3 243 aaKnown RBP16.61■□□□□ 0.25
CCDC116-201ENST00000292779 RBAK-RBAKDNI3L0D1 243 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 TBX3O15119 743 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 SERPING1P05155 500 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 PRLRP16471 622 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 RPA1P27694 616 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 SREBF1P36956 1147 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 CXCL9Q07325 125 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 GIT2Q14161 759 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 MAP9Q49MG5 647 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 MCTP2Q6DN12 878 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 SPICE1Q8N0Z3 855 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 ERMNQ8TAM6 284 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 SYN2Q92777 582 aaPredicted RBP16.6■□□□□ 0.25
CCDC116-201ENST00000292779 CCDC102AQ96A19 550 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 EXOC4Q96A65 974 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 CSRNP1Q96S65 589 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 OSBPL9Q96SU4 736 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 GMLQ99445 158 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 DNM3Q9UQ16 869 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 ATRNL1Q5VV63 1379 aa16.6■□□□□ 0.25
CCDC116-201ENST00000292779 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 BMP3P12645 472 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 HOXA13P31271 388 aaPredicted RBP16.59■□□□□ 0.25
CCDC116-201ENST00000292779 TNNT3P45378 269 aaPredicted RBP16.59■□□□□ 0.25
CCDC116-201ENST00000292779 EDRF1Q3B7T1 1238 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
CCDC116-201ENST00000292779 TXLNBQ8N3L3 684 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 SYT2Q8N9I0 419 aaPredicted RBP16.59■□□□□ 0.25
CCDC116-201ENST00000292779 PSMB7Q99436 277 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 REEP2Q9BRK0 252 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 FAM184BQ9ULE4 1060 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 FAN1Q9Y2M0 1017 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 SBF1O95248 1867 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 OPLAHO14841 1288 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 CETN3O15182 167 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 NCK2O43639 380 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 BUB1O43683 1085 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 ENTPD3O75355 529 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 FOSP01100 380 aaPredicted RBP16.59■□□□□ 0.25
CCDC116-201ENST00000292779 NR2F2P24468 414 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 CXCR5P32302 372 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 GSPT2Q8IYD1 628 aaKnown RBP16.59■□□□□ 0.25
CCDC116-201ENST00000292779 ACBD3Q9H3P7 528 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 HYOU1Q9Y4L1 999 aa16.59■□□□□ 0.25
CCDC116-201ENST00000292779 MSH4O15457 936 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 VIL1P09327 827 aaKnown RBP16.58■□□□□ 0.25
CCDC116-201ENST00000292779 MYBL2P10244 700 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 TCP1P17987 556 aaKnown RBP16.58■□□□□ 0.25
CCDC116-201ENST00000292779 EPS15P42566 896 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 MMP14P50281 582 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 KCNH2Q12809 1159 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 HSP90B2PQ58FF3 399 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 CCNI2Q6ZMN8 369 aaPredicted RBP16.58■□□□□ 0.25
CCDC116-201ENST00000292779 ZNF572Q7Z3I7 529 aaPredicted RBP16.58■□□□□ 0.25
CCDC116-201ENST00000292779 SFR1Q86XK3 245 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 MMGT1Q8N4V1 131 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 NOX5Q96PH1 765 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 VIPAS39Q9H9C1 493 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 ZNRF3Q9ULT6 936 aa16.58■□□□□ 0.25
CCDC116-201ENST00000292779 HOXD13P35453 343 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 CYP4A11Q02928 519 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 ARID5AQ03989 594 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 RAPGEF1Q13905 1077 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 TAF3Q5VWG9 929 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 RSBN1LQ6PCB5 846 aaPredicted RBP16.58■□□□□ 0.24
CCDC116-201ENST00000292779 CYP2W1Q8TAV3 490 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 FAM71BQ8TC56 605 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 FAM20AQ96MK3 541 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 GDAP1L1Q96MZ0 367 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 HINFPQ9BQA5 517 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 PSD3Q9NYI0 1048 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 SMARCAL1Q9NZC9 954 aa16.58■□□□□ 0.24
CCDC116-201ENST00000292779 PHACTR2O75167 634 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 ECE1P42892 770 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 LMAN1P49257 510 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 NAP1L1P55209 391 aaKnown RBP16.57■□□□□ 0.24
CCDC116-201ENST00000292779 ITIH3Q06033 890 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 KLHDC7AQ5VTJ3 777 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 NIM1KQ8IY84 436 aa16.57■□□□□ 0.24
CCDC116-201ENST00000292779 RNF10Q8N5U6 811 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms