RNA–Protein interactions for RNA: ENST00000290378.4

ACTC1-201, Transcript of actin, alpha, cardiac muscle 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTC1, Length 4,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTC1-201ENST00000290378 EARS2Q5JPH6 523 aaKnown RBP11.99□□□□□ -0.49
ACTC1-201ENST00000290378 CCDC26Q8TAB7 109 aa11.99□□□□□ -0.49
ACTC1-201ENST00000290378 ARHGEF2Q92974 986 aaKnown RBP11.99□□□□□ -0.49
ACTC1-201ENST00000290378 COA1Q9GZY4 146 aa11.99□□□□□ -0.49
ACTC1-201ENST00000290378 LIMA1Q9UHB6 759 aaKnown RBP11.99□□□□□ -0.49
ACTC1-201ENST00000290378 HIP1RO75146 1068 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 CRKP46108 304 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 SLFN13Q68D06 897 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 SNX29Q8TEQ0 813 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 ADAM33Q9BZ11 813 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 TRIM4Q9C037 500 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 SWAP70Q9UH65 585 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 PNPLA7Q6ZV29 1317 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 TCRBV5S4A2TA0A5A2 114 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 ECE2O60344 883 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 MMEP08473 750 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 COPB2P35606 906 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 DDR1Q08345 913 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 TMEM132AQ24JP5 1023 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 ZNF513Q8N8E2 541 aaPredicted RBP11.98□□□□□ -0.49
ACTC1-201ENST00000290378 DAGLAQ9Y4D2 1042 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 RIC1Q4ADV7 1423 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 PSMD14O00487 310 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 AKR1B1P15121 316 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 PMS1P54277 932 aaKnown RBP11.98□□□□□ -0.49
ACTC1-201ENST00000290378 PPP2R5BQ15173 497 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 DENND2CQ68D51 928 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 INTS8Q75QN2 995 aaKnown RBP11.98□□□□□ -0.49
ACTC1-201ENST00000290378 SV2BQ7L1I2 683 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 LMBR1Q8WVP7 490 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 MED15Q96RN5 788 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 RIOK1Q9BRS2 568 aaKnown RBP11.98□□□□□ -0.49
ACTC1-201ENST00000290378 KCNQ5Q9NR82 932 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 PCDHA1Q9Y5I3 950 aa11.98□□□□□ -0.49
ACTC1-201ENST00000290378 EME2A4GXA9 379 aaPredicted RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 AGPSO00116 658 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 PRPF6O94906 941 aaKnown RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 CPP00450 1065 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 ZNF131P52739 623 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 PREPLQ4J6C6 727 aaPredicted RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 CCDC84Q86UT8 332 aaPredicted RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 SGMS1Q86VZ5 419 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 U2AF1L4Q8WU68 220 aaKnown RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 P2RX5Q93086 422 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 PYM1Q9BRP8 204 aaKnown RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 PNMA2Q9UL42 364 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 INTUQ9ULD6 942 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 TARSL2A2RTX5 802 aaKnown RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 CNGA1P29973 690 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 SMTNP53814 917 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 ASIC2Q16515 512 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 CALCRLQ16602 461 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 C12orf60Q5U649 245 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 ZNF449Q6P9G9 518 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 NOD2Q9HC29 1040 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 LRRD1A4D1F6 860 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 HMGB1P1B2RPK0 211 aaPredicted RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 ABCB5Q2M3G0 1257 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 NUGGCQ68CJ6 796 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 ZNF512BQ96KM6 892 aaPredicted RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 CELF4Q9BZC1 486 aaKnown RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 ACTR5Q9H9F9 607 aaPredicted RBP11.97□□□□□ -0.49
ACTC1-201ENST00000290378 SNX24Q9Y343 169 aa11.97□□□□□ -0.49
ACTC1-201ENST00000290378 GH2P01242 217 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 CYP4A11Q02928 519 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 ZBTB16Q05516 673 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 SEPT2Q15019 361 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 NSMFQ6X4W1 530 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 LONP2Q86WA8 852 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 LMNTD2Q8IXW0 634 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 NDST4Q9H3R1 872 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 VCPKMTQ9H867 229 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 PSTPIP2Q9H939 334 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 ZNF408Q9H9D4 720 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 SALL1Q9NSC2 1324 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 RAD51CO43502 376 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 EEF1GP26641 437 aaKnown RBP11.96□□□□□ -0.49
ACTC1-201ENST00000290378 EAPPQ56P03 285 aaPredicted RBP11.96□□□□□ -0.49
ACTC1-201ENST00000290378 HERC4Q5GLZ8 1057 aaPredicted RBP11.96□□□□□ -0.49
ACTC1-201ENST00000290378 ANKRD40Q6AI12 368 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 TTBK2Q6IQ55 1244 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 TTLL6Q8N841 843 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 DDX23Q9BUQ8 820 aaKnown RBP11.96□□□□□ -0.49
ACTC1-201ENST00000290378 MCM8Q9UJA3 840 aa11.96□□□□□ -0.49
ACTC1-201ENST00000290378 MRC1P22897 1456 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 FAM107AO95990 144 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 ZNF211Q13398 564 aaPredicted RBP11.96□□□□□ -0.5
ACTC1-201ENST00000290378 PRR16Q569H4 304 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 RDH13Q8NBN7 331 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 RETREG2Q8NC44 543 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 NKX2-3Q8TAU0 364 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 TMEM260Q9NX78 707 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 NOP53Q9NZM5 478 aaKnown RBP11.96□□□□□ -0.5
ACTC1-201ENST00000290378 CAPN11Q9UMQ6 739 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 REXO2Q9Y3B8 237 aaKnown RBP11.96□□□□□ -0.5
ACTC1-201ENST00000290378 IRF6O14896 467 aa11.96□□□□□ -0.5
ACTC1-201ENST00000290378 PRPF3O43395 683 aaKnown RBP11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms