RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 IFT88Q13099 833 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 C6orf89Q6UWU4 347 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 C3orf20Q8ND61 904 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 MAGEC3Q8TD91 643 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 CEP95Q96GE4 821 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 ATP6V1G3Q96LB4 118 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 GLT8D2Q9H1C3 349 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 RBM12Q9NTZ6 932 aaKnown RBP11.38□□□□□ -0.59
SKA1-201ENST00000285116 PITPNM2Q9BZ72 1349 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 MYH4Q9Y623 1939 aa11.38□□□□□ -0.59
SKA1-201ENST00000285116 MRPL12P52815 198 aaKnown RBP11.37□□□□□ -0.59
SKA1-201ENST00000285116 RHBDL3P58872 404 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 SATB1Q01826 763 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 SNCBQ16143 134 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 USP17L2Q6R6M4 530 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 CACNA2D4Q7Z3S7 1137 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 ARFGAP2Q8N6H7 521 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 HPS3Q969F9 1004 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 PLCB1Q9NQ66 1216 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 FBXL5Q9UKA1 691 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 BTDP43251 543 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 MRPS25P82663 173 aaKnown RBP11.37□□□□□ -0.59
SKA1-201ENST00000285116 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
SKA1-201ENST00000285116 GFPT1Q06210 699 aaPredicted RBP11.37□□□□□ -0.59
SKA1-201ENST00000285116 GABPAQ06546 454 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 CDC37Q16543 378 aaPredicted RBP11.37□□□□□ -0.59
SKA1-201ENST00000285116 LRIG3Q6UXM1 1119 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 EP400NLQ6ZTU2 488 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 CCDC121Q6ZUS5 278 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 MBOAT7Q96N66 472 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 GANQ9H2C0 597 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 BIN2Q9UBW5 565 aaPredicted RBP11.37□□□□□ -0.59
SKA1-201ENST00000285116 NENFQ9UMX5 172 aa11.37□□□□□ -0.59
SKA1-201ENST00000285116 BZW2Q9Y6E2 419 aaKnown RBP11.37□□□□□ -0.59
SKA1-201ENST00000285116 PNMA6FA0A0J9YX94 578 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 HSPA9P38646 679 aaKnown RBP11.36□□□□□ -0.59
SKA1-201ENST00000285116 DIXDC1Q155Q3 683 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 FAM26FQ5R3K3 315 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 TRAPPC3LQ5T215 181 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 MOXD1Q6UVY6 613 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 CALR3Q96L12 384 aaKnown RBP11.36□□□□□ -0.59
SKA1-201ENST00000285116 CCDC114Q96M63 670 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 KCTD10Q9H3F6 313 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 CENPHQ9H3R5 247 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 MTMR4Q9NYA4 1195 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 THSD7AQ9UPZ6 1657 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 CYP3A7-CYP3A51PA0A087WV96 503 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 CCDC189A1A4V9 331 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 SCP2P22307 547 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 CYP3A7P24462 503 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 SEC24CP53992 1094 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 RASSF7Q02833 373 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 GRIK5Q16478 980 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 DPY19L2P1Q6NXN4 242 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 MAPKAPK5Q8IW41 473 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 PARP9Q8IXQ6 854 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 HAS1Q92839 578 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 TMEM260Q9NX78 707 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 USP17L5A8MUK1 530 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 E7EVH7 732 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 TDP2O95551 362 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 ITGB3BPQ13352 177 aaPredicted RBP11.36□□□□□ -0.59
SKA1-201ENST00000285116 CRYMQ14894 314 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 KCNK18Q7Z418 384 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 CCDC65Q8IXS2 484 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 TEX11Q8IYF3 940 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 KCTD17Q8N5Z5 321 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 FBXO41Q8TF61 875 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 TBC1D22AQ8WUA7 517 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 PIK3R5Q8WYR1 880 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 PBKQ96KB5 322 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 PANK4Q9NVE7 773 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 NFU1Q9UMS0 254 aa11.36□□□□□ -0.59
SKA1-201ENST00000285116 ZBTB48P10074 688 aaPredicted RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 EZRP15311 586 aaKnown RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 ERCC3P19447 782 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 ATP2B4P23634 1241 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 PRKCIP41743 596 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 CARSP49589 748 aaKnown RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 TNNC1P63316 161 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 IFI16Q16666 785 aaKnown RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 ZNF772Q68DY9 489 aaPredicted RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 CYB5D1Q6P9G0 228 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 ACTRT1Q8TDG2 376 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 CYFIP2Q96F07 1278 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 EEF2KMTQ96G04 330 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 BMP2KQ9NSY1 1161 aaPredicted RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 INTUQ9ULD6 942 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 SUGT1Q9Y2Z0 365 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 STK24Q9Y6E0 443 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 A0A0A6YYK5 440 aaPredicted RBP11.35□□□□□ -0.59
SKA1-201ENST00000285116 GLI1P08151 1106 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 CXCR5P32302 372 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 ZNF543Q08ER8 600 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 CUL1Q13616 776 aa11.35□□□□□ -0.59
SKA1-201ENST00000285116 DYMQ7RTS9 669 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms