RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 CCDC47Q96A33 483 aaKnown RBP12.2□□□□□ -0.46
GGPS1-201ENST00000282841 EFCC1Q9HA90 598 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 TRMT1Q9NXH9 659 aaKnown RBP12.2□□□□□ -0.46
GGPS1-201ENST00000282841 N4BP3O15049 544 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 PRPF6O94906 941 aaKnown RBP12.2□□□□□ -0.46
GGPS1-201ENST00000282841 MYBP10242 640 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 STIM1Q13586 685 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 ZC2HC1CQ53FD0 456 aaPredicted RBP12.2□□□□□ -0.46
GGPS1-201ENST00000282841 FAM26FQ5R3K3 315 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 LDLRAD1Q5T700 205 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 RINT1Q6NUQ1 792 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 MAGEF1Q9HAY2 307 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 AGTPBP1Q9UPW5 1226 aa12.2□□□□□ -0.46
GGPS1-201ENST00000282841 USP27XA6NNY8 438 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 SKILP12757 684 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 NMT1P30419 496 aaKnown RBP12.19□□□□□ -0.46
GGPS1-201ENST00000282841 KLK7P49862 253 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 SETQ01105 290 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-201ENST00000282841 PPIL2Q13356 520 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 HS1BP3Q53T59 392 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 TCP11X2Q5H9J9 407 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 VSTM4Q8IW00 320 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 ANKRD13CQ8N6S4 541 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 SYT2Q8N9I0 419 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-201ENST00000282841 TCEAL9Q9UHQ7 104 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 RNF225M0QZC1 329 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-201ENST00000282841 CCND2P30279 289 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 CDC25BP30305 580 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 NR1I3Q14994 352 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 CST9Q5W186 159 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
GGPS1-201ENST00000282841 GPRC5CQ9NQ84 441 aa12.19□□□□□ -0.46
GGPS1-201ENST00000282841 SOWAHBA6NEL2 793 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 B4DLN1 442 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 CXCL11O14625 94 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 MYL1P05976 194 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 CYFIP1Q7L576 1253 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 POLR3CQ9BUI4 534 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-201ENST00000282841 GBA2Q9HCG7 927 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-201ENST00000282841 ADD3Q9UEY8 706 aaKnown RBP12.18□□□□□ -0.46
GGPS1-201ENST00000282841 KCNH4Q9UQ05 1017 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 CCL15-CCL14A0A0B4J2E2 113 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 USO1O60763 962 aaKnown RBP12.18□□□□□ -0.46
GGPS1-201ENST00000282841 CCNE1P24864 410 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 HOXA7P31268 230 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-201ENST00000282841 CCL15Q16663 113 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 B3GNT9Q6UX72 402 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 MYCT1Q8N699 235 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
GGPS1-201ENST00000282841 SCFD1Q8WVM8 642 aa12.18□□□□□ -0.46
GGPS1-201ENST00000282841 A0A1B0GTH6 734 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 PVALEFA0A1B0GWK0 134 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 BTBD19C9JJ37 291 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 PDHXO00330 501 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 EYA4O95677 639 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 FDX1P10109 184 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 COPB1P53618 953 aaKnown RBP12.17□□□□□ -0.46
GGPS1-201ENST00000282841 OAZ1P54368 228 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 EHHADHQ08426 723 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 DMTNQ08495 405 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 SNAPC2Q13487 334 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 EPHA7Q15375 998 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 NLRX1Q86UT6 975 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 CCDC65Q8IXS2 484 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 BRI3BPQ8WY22 251 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 RIT2Q99578 217 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 MRPL44Q9H9J2 332 aaKnown RBP12.17□□□□□ -0.46
GGPS1-201ENST00000282841 PCDHA2Q9Y5H9 948 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 KIAA1217Q5T5P2 1943 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 ATP2A1O14983 1001 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 GCNT3O95395 438 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 CCZ1BP86790 482 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 CCZ1P86791 482 aaPredicted RBP12.17□□□□□ -0.46
GGPS1-201ENST00000282841 UBXN1Q04323 297 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 SWSAP1Q6NVH7 229 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 MYOCDQ8IZQ8 938 aa12.17□□□□□ -0.46
GGPS1-201ENST00000282841 CNOT6LQ96LI5 555 aaKnown RBP12.17□□□□□ -0.46
GGPS1-201ENST00000282841 CLIC2O15247 247 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 CBFA2T2O43439 604 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 SFPQP23246 707 aaKnown RBP eCLIP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 HOXD13P35453 343 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 GHRHRQ02643 423 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 RBL2Q08999 1139 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 NOLC1Q14978 699 aaKnown RBP eCLIP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 LY6KQ17RY6 165 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 GJC2Q5T442 439 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 FAM43BQ6ZT52 329 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 RIOX2Q8IUF8 465 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 KIAA1524Q8TCG1 905 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 DHTKD1Q96HY7 919 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 GABBR1Q9UBS5 961 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 ARHGEF35A5YM69 484 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 TBCAO75347 108 aaKnown RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 KCNA2P16389 499 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 MTIF2P46199 727 aaKnown RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 ALDH5A1P51649 535 aaPredicted RBP12.16□□□□□ -0.46
GGPS1-201ENST00000282841 SPECC1LQ69YQ0 1117 aa12.16□□□□□ -0.46
GGPS1-201ENST00000282841 C1orf186Q6ZWK4 172 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms