RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 RNF169Q8NCN4 708 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 SPDYE1Q8NFV5 336 aaPredicted RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 NCLNQ969V3 563 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 CARD14Q9BXL6 1004 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 EDC4Q6P2E9 1401 aaKnown RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 LRRIQ4A6NIV6 560 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 KDM1AO60341 852 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 SERPINI2O75830 405 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 TSTA3Q13630 321 aaPredicted RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 MAPRE2Q15555 327 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 NAF1Q96HR8 494 aaKnown RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 KIF19Q2TAC6 998 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 ZBTB41Q5SVQ8 909 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 GPATCH4Q5T3I0 446 aaKnown RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 ARHGEF25Q86VW2 580 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 NSUN7Q8NE18 718 aaKnown RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 FAM193BQ96PV7 902 aaPredicted RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 KIF2CQ99661 725 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 USP40Q9NVE5 1235 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 GCNT4Q9P109 453 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 DBNLQ9UJU6 430 aaKnown RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 PAIP2BQ9ULR5 123 aaKnown RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 SUFUQ9UMX1 484 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 FIS1Q9Y3D6 152 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 ARHGEF10O15013 1369 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 PLB1Q6P1J6 1458 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 TJP3O95049 919 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 TRPC1P48995 793 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 CEP55Q53EZ4 464 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 RARS2Q5T160 578 aaKnown RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 RGS9BPQ6ZS82 235 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 MB21D1Q8N884 522 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 ENAHQ8N8S7 591 aaPredicted RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 NACC1Q96RE7 527 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 TRIM45Q9H8W5 580 aaPredicted RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 WDR91A4D1P6 747 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 NEURL1BA8MQ27 555 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 CCDC22O60826 627 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 GFPT2O94808 682 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 AP1B1Q10567 949 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 GPKOWQ92917 476 aaPredicted RBP eCLIP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 OSBPL3Q9H4L5 887 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 H0Y3Z8 333 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 ZNF189O75820 626 aaPredicted RBP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 HNRNPCP07910 306 aaKnown RBP eCLIP9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 AMNQ9BXJ7 453 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 NDST4Q9H3R1 872 aa9.35□□□□□ -0.91
SCUBE3-201ENST00000274938 RNF103-CHMP3A0A140T963 221 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 GOLGA8MH3BSY2 632 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 ARFIP2P53365 341 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 MORF4L2Q15014 288 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 ZC3H12BQ5HYM0 836 aaKnown RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 EPM2AIP1Q7L775 607 aaPredicted RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 METTL23Q86XA0 190 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 SNX25Q9H3E2 840 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 SAYSD1Q9NPB0 183 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 G3BP2Q9UN86 482 aaKnown RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 RASA4BC9J798 803 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 RASA4O43374 803 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 NFKBIAP25963 317 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 GOLGA8FQ08AF8 430 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 GOLGA8DPQ0D2H9 430 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 PKP1Q13835 747 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 DLGAP5Q15398 846 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 BTBD6Q96KE9 485 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 FGGP02679 453 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 TMEM259Q4ZIN3 620 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 SPOUT1Q5T280 376 aaKnown RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 LRRC8BQ6P9F7 803 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 TTC17Q96AE7 1141 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 ECT2Q9H8V3 914 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 CPSF3Q9UKF6 684 aaKnown RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 SRPRBQ9Y5M8 271 aaKnown RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 SLC4A7Q9Y6M7 1214 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 SYNJ2BP-COX16A0A087WUM0 186 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 FGAP02671 866 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 CXCR5P32302 372 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 MXI1P50539 228 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 PABPC4Q13310 644 aaKnown RBP eCLIP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 TFDP2Q14188 446 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 ALKBH5Q6P6C2 394 aaKnown RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 KIAA2013Q8IYS2 634 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 TEX9Q8N6V9 391 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 UIMC1Q96RL1 719 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 COX16Q9P0S2 106 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 GOLGA8SH3BPF8 625 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 ALAS1P13196 640 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 AARSP49588 968 aaKnown RBP eCLIP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 DDX28Q9NUL7 540 aaKnown RBP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 DONSONQ9NYP3 566 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 FAM187AA6NFU0 413 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 RAD23BP54727 409 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 STX19Q8N4C7 294 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 FAM149B1Q96BN6 582 aa9.34□□□□□ -0.91
SCUBE3-201ENST00000274938 CCDC17Q96LX7 622 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms