RNA–Protein interactions for RNA: ENST00000274901.8

HMGCLL1-201, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-201ENST00000274901 ADAM9Q13443 819 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 ENOX2Q16206 610 aaKnown RBP10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 EIF1ADQ8N9N8 165 aaKnown RBP10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 CNBD1Q8NA66 436 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 MARCH10Q8NA82 808 aaPredicted RBP10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 ANKLE1Q8NAG6 615 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 UTP4Q969X6 686 aaKnown RBP10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 NGLY1Q96IV0 654 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 TSC22D3Q99576 134 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 EPAS1Q99814 870 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 TRIM31Q9BZY9 425 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 CNOT10Q9H9A5 744 aaKnown RBP10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 PLCH1Q4KWH8 1693 aa10.02□□□□□ -0.8
HMGCLL1-201ENST00000274901 HGSO14964 777 aaPredicted RBP10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 PDHA1P08559 390 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 VIMP08670 466 aaKnown RBP10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 FERP16591 822 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 XBP1P17861 261 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 ADRA2BP18089 450 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 LONP1P36776 959 aaKnown RBP10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 MSH2P43246 934 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 FAM98CQ17RN3 349 aaKnown RBP10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 METTL24Q5JXM2 366 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 MFN1Q8IWA4 741 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 TTLL11Q8NHH1 800 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 ZNF526Q8TF50 670 aaPredicted RBP10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 TBC1D5Q92609 795 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 AZI2Q9H6S1 392 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 ARHGEF3Q9NR81 526 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 LMCD1Q9NZU5 365 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 NOC2LQ9Y3T9 749 aaKnown RBP10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 NR2E1Q9Y466 385 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 CNTNAP5Q8WYK1 1306 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 ITGB4P16144 1822 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 BCL9O00512 1426 aa10.02□□□□□ -0.81
HMGCLL1-201ENST00000274901 GPR75-ASB3A0A0A6YYF3 556 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 SNAP23O00161 211 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 SNX3O60493 162 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 SMIM24O75264 130 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 STARD3NLO95772 234 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 GNAZP19086 355 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 ROR2Q01974 943 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 ARID5AQ03989 594 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 BNIP1Q12981 228 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 ASRGL1Q7L266 308 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 SRBD1Q8N5C6 995 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 EZH1Q92800 747 aaPredicted RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 RNF25Q96BH1 459 aaPredicted RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 KLHL29Q96CT2 875 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 FAM89AQ96GI7 184 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 PBKQ96KB5 322 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 G3BP2Q9UN86 482 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 C2CD2Q9Y426 696 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 ASB3Q9Y575 518 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 FLT1P17948 1338 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 SPATA31A5Q5VU36 1347 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 SPATA31A7Q8IWB4 1347 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 PAPPAQ13219 1627 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 SSU72P8A0A1W2PR75 194 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 STXBP3O00186 592 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 RNF8O76064 485 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 PLCG1P19174 1290 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 EVX2Q03828 476 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 MTMR3Q13615 1198 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 LAMB3Q13751 1172 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 IFI16Q16666 785 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 NUGGCQ68CJ6 796 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 NBPF5PQ86XG9 351 aaPredicted RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 FAM114A1Q8IWE2 563 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 METTL13Q8N6R0 699 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 MIGA1Q8NAN2 632 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 GLIS3Q8NEA6 775 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 UHMK1Q8TAS1 419 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 TEKT4Q8WW24 435 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 ANKS1AQ92625 1134 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 PYM1Q9BRP8 204 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 TRIM9Q9C026 710 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 NUCKS1Q9H1E3 243 aaKnown RBP10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 KANSL2Q9H9L4 492 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 SAMD15Q9P1V8 674 aa10.01□□□□□ -0.81
HMGCLL1-201ENST00000274901 CYP2D7A0A087X1C5 515 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 TLDC2A0PJX2 215 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 BICDL2A1A5D9 508 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 SMAPO00193 183 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 PPFIA2O75334 1257 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 GM2AP17900 193 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 COPB2P35606 906 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 GCLCP48506 637 aaPredicted RBP10□□□□□ -0.81
HMGCLL1-201ENST00000274901 COPS2P61201 443 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 TROAPQ12815 778 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 USP4Q13107 963 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 RPS6KA1Q15418 735 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 CCDC38Q502W7 563 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 FOXB2Q5VYV0 432 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 TMTC3Q6ZXV5 915 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 GALNT15Q8N3T1 639 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 FITM2Q8N6M3 262 aa10□□□□□ -0.81
HMGCLL1-201ENST00000274901 VGLL2Q8N8G2 317 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms