RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 CCNA1P78396 465 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 GRM1Q13255 1194 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SEPT8Q92599 483 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 TRIM55Q9BYV6 548 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 KRT38O76015 456 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 CHGBP05060 677 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 BTDP43251 543 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 KLHL38Q2WGJ6 581 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SIX6OS1Q8N1H7 587 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 DNAAF3Q8N9W5 541 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SEPT9Q9UHD8 586 aaPredicted RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PLAAQ9Y263 795 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 FOXP2O15409 715 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 KIF1CO43896 1103 aaKnown RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 TRPA1O75762 1119 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 ESRRAP11474 423 aaPredicted RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 GFAPP14136 432 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 GDAP1Q8TB36 358 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 CLIC6Q96NY7 704 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 MXD3Q9BW11 206 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SUN2Q9UH99 717 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PTCH1Q13635 1447 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 ANXA13P27216 316 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 DPCR1Q3MIW9 517 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SLFN12LQ6IEE8 588 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 RSRC2Q7L4I2 434 aaKnown RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PAWRQ96IZ0 340 aaKnown RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 FGD4Q96M96 766 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 GCOM2Q9BZD3 368 aaPredicted RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PARVGQ9HBI0 331 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SPTLC3Q9NUV7 552 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 ADD3Q9UEY8 706 aaKnown RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 TARSL2A2RTX5 802 aaKnown RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 ZBED1O96006 694 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SERPINB10P48595 397 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 RWDD2BP57060 319 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 RESP18Q5W5W9 173 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 APOA5Q6Q788 366 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 NSUN7Q8NE18 718 aaKnown RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 M0R2C6 588 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 TCP11X2Q5H9J9 407 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SARM1Q6SZW1 724 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 C11orf57Q6ZUT1 292 aaPredicted RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PARD6BQ9BYG5 372 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 CYP26B1Q9NR63 512 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PCDHA5Q9Y5H7 936 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 ARHGAP10A1A4S6 786 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 STRIP2Q9ULQ0 834 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 ANO9A1A5B4 782 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 BTBD18B2RXH4 712 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SH2B2O14492 632 aaPredicted RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PPIP5K2O43314 1243 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PRPF3O43395 683 aaKnown RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SRGAP2CP0DJJ0 459 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 RNF207Q6ZRF8 634 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 TMCO5AQ8N6Q1 288 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 ZNF577Q9BSK1 485 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 USP44Q9H0E7 712 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 MMEP08473 750 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 MXI1P50539 228 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PYROXD1Q8WU10 500 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 SCG3Q8WXD2 468 aaKnown RBP8.57□□□□□ -1.04
LIMD1-201ENST00000273317 ZFP69BQ9UJL9 534 aa8.57□□□□□ -1.04
LIMD1-201ENST00000273317 PSAPP07602 524 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 MYBL1P10243 752 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 IFNA8P32881 189 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 IL1RL1Q01638 556 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 SYT2Q8N9I0 419 aaPredicted RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 ATG3Q9NT62 314 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 RCOR1Q9UKL0 485 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 PALD1Q9ULE6 856 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 TMEM232C9JQI7 657 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 GFPT2O94808 682 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 MOCS3O95396 460 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 RCAN1P53805 252 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 AP2B1P63010 937 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 FAM133AQ8N9E0 248 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 TRIM45Q9H8W5 580 aaPredicted RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 STOML1Q9UBI4 398 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 SOWAHDA6NJG2 315 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 SMARCA1P28370 1054 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 TSPY1Q01534 308 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 GRAMD1BQ3KR37 738 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 ACRBPQ8NEB7 543 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 OR9Q1Q8NGQ5 310 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 CEP72Q9P209 647 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 CPSF3Q9UKF6 684 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 MAP3K10Q02779 954 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 ELMSAN1Q6PJG2 1045 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 SUGCTQ9HAC7 445 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 CPSF1Q10570 1443 aaKnown RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 H3BRJ5 948 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 CCNE1P24864 410 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 CIITAP33076 1130 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 KIF23Q02241 960 aaPredicted RBP8.56□□□□□ -1.04
LIMD1-201ENST00000273317 TRIM59Q8IWR1 403 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 NDUFAF2Q8N183 169 aa8.56□□□□□ -1.04
LIMD1-201ENST00000273317 TTC13Q8NBP0 860 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms